XLOC_022389 (si:dkey-205h13.1)


Basic Information

Item Value
gene id XLOC_022389
gene name si:dkey-205h13.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 26503876 ~ 26523026 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044164
AACAGGTGCAGGACAGAACAGTATCGTCGTTAATAGAAAATCATAACTGTTTATCACTGAAtgcgaataaaataaaaataaaaaatacagtgtcGTCGACTGAATTCAACAACAGCCGTTATTTGTCTGCGTTTGTTTTGATTGGCATCGCTCTGTGCTTGACATTGAAGGTGAGGGAACTGCCTGAGCCAGTAAAGGAAGAAGTTTCTTGTCATTTAACCCTGCTACTGGCTAGACCGTTTCATTTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGCCTTTCTTCAGGAAGCGAAAAAGCTGCTCCTAAACGAACAGGCGAACTGGGCACATCTTAAGGAGTTTGCCCGTAAAAATGCTGCCAATGCTCTTTCTGTTGCCAACCTTCTCATGGGCATGGCCTCGATCCTCTGCAGTCTCAACGGCCATCATTATGCCGCATGCTGGCTGGTTCTGATTGGGTACCTGCTGGATTTGGCAGATGGAGCGGTTGCCAGGCACCTGAATGCATGTTCTGCTCTGGGTGCAAAGTTGGATGATTTTGCTGATTTCACAACATTTGGAATAGCAACTTCACTCCTCCTGAGGACACCCAGTCTGCTGGATAACATCCTGTGCATGCTCTACATGCTGTCTGTCTTTGTACGTCTCTGCTTCTTCTCCAGCGGAATCCCATTTGTGTACCGTGGCCTGCCGTGCATCTACTCCTCGGCCATCCTCGTGTGTGGTTCTCTACTGACTGGAGGAAATATGGCCGTACTGAGAATCTTAGCTGTGGCCATGATTCTCTTCATGATCAGTCAGAACTTCTACCCGCATGACAGAGTGCTGGAGTCCCAGGCCTGGAAGAAGGTGGTCTACATCGGAGgAGTTGTGATGGTGTTCTGCTCCTCCTTTCCTCCAGCTTGTGTTTACTACTTGTTATGGTCAGTTTCCTATATACTGTTTCCAACAACCCTGTGGAGCTGCAAAGTGTAAGAGAGGCTCTGTCCTCACACAATCCCTTTCTGCTTCTTGAAAACAactcagaaaaactttttttttttttaatcatttttgttttgaagTGATGAACTTCATGAAATGGACGTCCTCTGGGAGGCTTCGGACGTCTTGATTGCTGCTGATGTTTTTTGCTAAGAATGAGAAATGCTTTCTGCCTCACATACAGTATAACGTCAtgcttttaaatgtcacgttGACAGAAATATTAACAGTATGTGTGTTGTTTGTCTCACAGCTCGGTCTGCCTGAATCATATGTGAGGCAAGAAACTGTGTAGAGATTGTCAGATTTGCTGTGGATTTTATATTCTTATGTTTTTCGGTTGTTTGAGAGACTGATTGGAAAAAGGTTTCACAACTCAATA
>TCONS_00044165
AACAGGTGCAGGACAGAACAGTATCGTCGTTAATAGAAAATCATAACTGTTTATCACTGAAtgcgaataaaataaaaataaaaaatacagtgtcGTCGACTGAATTCAACAACAGCCGTTATTTGTCTGCGTTTGTTTTGATTGGCATCGCTCTGTGCTTGACATTGAAGCCAGTAAAGGAAGAAGTTTCTTGTCATTTAACCCTGCTACTGGCTAGACCGTTTCATTTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGCCTTTCTTCAGGAAGCGAAAAAGCTGCTCCTAAACGAACAGGCGAACTGGGCACATCTTAAGGAGTTTGCCCGTAAAAATGCTGCCAATGCTCTTTCTGTTGCCAACCTTCTCATGGGCATGGCCTCGATCCTCTGCAGTCTCAACGGCCATCATTATGCCGCATGCTGGCTGGTTCTGATTGGGTACCTGCTGGATTTGGCAGATGGAGCGGTTGCCAGGCACCTGAATGCATGTTCTGCTCTGGGTGCAAAGTTGGATGATTTTGCTGATTTCACAACATTTGGAATAGCAACTTCACTCCTCCTGAGGACACCCAGTCTGCTGGATAACATCCTGTGCATGCTCTACATGCTGTCTGTCTTTGTACGTCTCTGCTTCTTCTCCAGCGGAATCCCATTTGTGTACCGTGGCCTGCCGTGCATCTACTCCTCGGCCATCCTCGTGTGTGGTTCTCTACTGACTGGAGGAAATATGGCCGTACTGAGAATCTTAGCTGTGGCCATGATTCTCTTCATGATCAGTCAGAACTTCTACCCGCATGACAGAGTGCTGGAGTCCCAGGCCTGGAAGAAGGTGGTCTACATCGGAGgAGTTGTGATGGTGTTCTGCTCCTCCTTTCCTCCAGCTTGTGTTTACTACTTGTTATGGTCAGTTTCCTATATACTGTTTCCAACAACCCTGTGGAGCTGCAAAGTGTAAGAGAGGCTCTGTCCTCACACAATCCCTTTCTGCTTCTTGAAAACAactcagaaaaactttttttttttttaatcatttttgttttgaagTGATGAACTTCATGAAATGGACGTCCTCTGGGAGGCTTCGGACGTCTTGATTGCTGCTGATGTTTTTTGCT
>TCONS_00044166
GTGCAGGACAGAACAGTATCGTCGTTAATAGAAAATCATAACTGTTTATCACTGAAtgcgaataaaataaaaataaaaaatacagtgtcGTCGACTGAATTCAACAACAGCCGTTATTTGTCTGCGTTTGTTTTGATTGGCATCGCTCTGTGCTTGACATTGAAGCCAGTAAAGGAAGAAGTTTCTTGTCATTTAACCCTGCTACTGGCTAGACCGTTTCATTTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGCCTTTCTTCAGGAAGCGAAAAAGCTGCTCCTAAACGAACAGGCGAACTGGGCACATCTTAAGGAGTTTGCCCGTAAAAATGCTGCCAATGCTCTTTCTGTTGCCAACCTTCTCATGGGCATGGCCTCGATCCTCTGCAGTCTCAACGGCCATCATTATGCCGCATGCTGGCTGGTTCTGATTGGGTACCTGCTGGATTTGGCAGATGGAGCGGTTGCCAGGCACCTGAATGCATGTTCTGCTCTGGGTGCAAAGTTGGATGATTTTGCTGATTTCACAACATTTGGAATAGCAACTTCACTCCTCCTGAGGACACCCAGTCTGCTGGATAACATCCTGTGCATGCTCTACATGCTGTCTGTCTTTGTACGTCTCTGCTTCTTCTCCAGCGGAATCCCATTTGTGTACCGTGGCCTGCCGTGCATCTACTCCTCGGCCATCCTCGTGTGTGGTTCTCTACTGACTGGAGGAAATATGGCCGTACTGAGAATCTTAGCTGTGGCCATGATTCTCTTCATGATCAGTCAGAACTTCTACCCGCATG
>TCONS_00044167
GATTAAAGTACATGATTTATTATGTAAGTAGTTATAAATATCACAATGCATGTTTTATTACTTACTAATGATTAAATGTTGTGCAAAGTCACTGGATAGAGTGATATGGAGTAACATTTTAAAGTTTAACTAGTTGACTTCATGctgctttaatatatttttacattatgtTTAACTCTCAAAACCATGCACAGACAAAAATGGAGCTGTTGTGTAACTGCTCACGTTTCTTTTTGGTAGCCTTTCTTCAGGAAGCGAAAAAGCTGCTCCTAAACGAACAGGCGAACTGGGCACATCTTAAGGAGTTTGCCCGTAAAAATGCTGCCAATGCTCTTTCTGTTGCCAACCTTCTCATGGGCATGGCCTCGATCCTCTGCAGTCTCAACGGCCATCATTATGCCGCATGCTGGCTGGTTCTGATTGGGTACCTGCTGGATTTGGCAGATGGAGCGGTTGCCAGGCACCTGAATGCATGTTCTGCTCTGGGTGCAAAGTTGGATGATTTTGCTGATTTCACAACATTTGGAATAGCAACTTCACTCCTCCTGAGGACACCCAGTCTGCTGGATAACATCCTGTGCATGCTCTACATGCTGTCTGTCTTTGTACGTCTCTGCTTCTTCTCCAGCGGAATCCCATTTGTGTACCGTGGCCTGCCGTGCATCTACTCCTCGGCCATCCTCGTG
>TCONS_00044168
GTTTCTTGTCATTTAACCCTGCTACTGGCTAGACCGTTTCATTTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGAGCAGTGTGGCGTGCTTTTGGAGCAGATCTGTCTGTTTTGCTGATCGGTGGAAGACGAGGGGAGTGTTCATTTGCTAGTGGCACAGAAATTACTCTCTTTAAATGTACATGTGTTTATGCATGCTTCACTTACATAGAAAAGCAGCTTATGCCAAATAACGAAAGCTGTGTTGTCAAATGACAATTTTTTGTGTCTTTTCTCATGCGATATCTGCAAATGGTGGCTCTTTTTGATCTCTAGCATATTGCATAAAATGTGATGCGAATGATAATGTGAATGTCTGTAGCAAAAAGACACATTCAAGCCACTTGAGATGTTCGTTTAGATTTTATGCCCACTGATTTCCTTCAACACAAAGACCTCTTTGTGCGACTTCATTGAAAATcactgcagtgtttcagcatctTGGTCACACTTAAGGAAAAGCACTAGAATTTTAACAAGCCTTTCTTGcagttaatattttttcttttgtggtA
>TCONS_00044170
ATCACTTTTAACGCAGTCGTCTCCAGCATCGTCTATATGATCGACTCAGCCGTCGAGACGCAGCGTTCATTTCGAGTAGCATCCGATGCGTGCTGAACAAAGTTTAGAGAAAGAACTAGATCTGCTTCGACGTCATTTCCGATGGAATATTCCAGTGAATCCTGATATGCCTTTAAAAAGAGACCCTGAATAAGAGAAATGTGTTGTCTGTCATTAACAGGTGCAGGACAGAACAGTATCGTCGTTAATAGAAAATCATAACTGTTTATCACTGAAtgcgaataaaataaaaataaaaaatacagtgtcGTCGACTGAATTCAACAACAGCCGTTATTTGTCTGCGTTTGTTTTGATTGGCATCGCTCTGTGCTTGACATTGAAGTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGGTATGTACATTTATTATATTGCTATTTTTCTAAATGACACCACGTCATCTCAGCTCCTTATACAACCAAATAAATTtctgttagaattttttttacatcGTTTTAATAATGTGTGGCACTAACCTAAGTGGTCAGTACAAGAACTGGCACAAGATCTACTGTAGAAACAACTGTGCAGTTTGGGAAAACAGTTGTGGGTTTCCTAACTAACTAAGGGCATTTCTGTAGAGCATTGGTTGTACTTTAACTACAGTTAGTGTCTAGAGCTGGGCAATCTGTCATTGGTGCCACTTGTCTAATAGTTTCCTATTGAGGACT
>TCONS_00044169
CGACATTTCAGCTGAGATATTCCCACATCCAGCTTCACCCTCTCATATCACTTTTAACGCAGTCGTCTCCAGCATCGTCTATATGATCGACTCAGCCGTCGAGACGCAGCGTTCATTTCGAGTAGCATCCGATGCGTGCTGAACAAAGTTTAGAGAAAGAACTAGATCTGCTTCGACGTCATTTCCGATGGAATATTCCAGTGAATCCTGATATGCCTTTAAAAAGAGACCCTGAATAAGAGAAATGTGTTGTCTGTCATTAACAGGTGCAGGACAGAACAGTATCGTCGTTAATAGAAAATCATAACTGTTTATCACTGAAtgcgaataaaataaaaataaaaaatacagtgtcGTCGACTGAATTCAACAACAGCCGTTATTTGTCTGCGTTTGTTTTGATTGGCATCGCTCTGTGCTTGACATTGAAGCCAGTAAAGGAAGAAGTTTCTTGTCATTTAACCCTGCTACTGGCTAGACCGTTTCATTTGCTATTTGGCTTGAAGATCTCTGTAGAACATCATGATCCTCCTGACTCCTACTTCTGGTATGTACATTTATTATATTGCTATTTTTCTAAATGACACCACGTCATCTCAGCTCCTTATACAACCAAATAAATTtctgttagaattttttttacatcGTTTTAATAATGTGTGGCACTAACCTAAGTGGTCAGTACAAGAACTGGCACAAGATCTACTGTAGAAACAACTGTGCAGTTTGGGAAAACAGTTGTGGGTTTCCTAACTAACTAAGGGCATTTCTGTAGAGCATTGGTTGTACTTTAACTACAGTTAGTGTCTAGAGCTGGGCAATCTGTCATTGGTGCCACTTGTCTAATAGTTTCCTATTGAGGACT

Function

symbol description
si:dkey-205h13.1 Predicted to enable phosphotransferase activity, for other substituted phosphate groups. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM269 (transmembrane protein 269).

GO:

id name namespace
GO:0008654 phospholipid biosynthetic process biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016740 transferase activity molecular_function
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-227 Predicted to enable phosphotransferase activity, for other substituted phosphate groups. Predicted to act upstream of or within phospholipid biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM269 (transmembrane protein 269).

Ensembl:

ensembl_id ENSDARG00000079307

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044164 False 1396 mRNA 0.44 9 26503876 26522765
TCONS_00044165 False 1147 mRNA 0.46 8 26504107 26522765
TCONS_00044166 False 824 mRNA 0.46 7 26507713 26522760
TCONS_00044167 False 686 lncRNA 0.44 4 26507810 26514894
TCONS_00044168 False 581 mRNA 0.39 3 26516898 26521970
TCONS_00044170 False 761 lncRNA 0.39 2 26519466 26522980
TCONS_00044169 True 865 lncRNA 0.40 3 26519466 26523026

Neighbor

gene id symbol gene type direction distance location
XLOC_022388 MAGI3 coding downstream 15254 26232185 ~ 26488622 (-)
XLOC_022387 RSBN1 coding downstream 275799 26183772 ~ 26228077 (-)
XLOC_022386 rca2.2 coding downstream 375212 26125676 ~ 26128664 (-)
XLOC_022385 rca2.1 coding downstream 383595 26094481 ~ 26120281 (-)
XLOC_022384 gdi1 coding downstream 426838 26063149 ~ 26077038 (-)
XLOC_022390 si:dkey-205h13.2 coding upstream 972 26523998 ~ 26536055 (-)
XLOC_022391 hspg2 coding upstream 20690 26543716 ~ 26725637 (-)
XLOC_022392 CR855310.1 coding upstream 152626 26675652 ~ 26675770 (-)
XLOC_022393 NA coding upstream 226381 26749407 ~ 26759560 (-)
XLOC_022394 galnt6 coding upstream 240312 26763338 ~ 26784771 (-)
XLOC_022380 BX005414.1 non-coding downstream 710783 25789132 ~ 25793093 (-)
XLOC_022379 NA non-coding downstream 717792 25783695 ~ 25786084 (-)
XLOC_022376 NA non-coding downstream 1199857 25302730 ~ 25304019 (-)
XLOC_022373 NA non-coding downstream 1409548 25093873 ~ 25094328 (-)
XLOC_022370 CR376748.1 non-coding downstream 1577528 24880227 ~ 24926348 (-)
XLOC_022396 NA non-coding upstream 437984 26961010 ~ 27015160 (-)
XLOC_022400 NA non-coding upstream 668930 27191956 ~ 27199095 (-)
XLOC_022408 CR354381.1 non-coding upstream 1057138 27580164 ~ 27580292 (-)

Expression


Co-expression Network