XLOC_022486 (grasp)


Basic Information

Item Value
gene id XLOC_022486
gene name grasp
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 32199588 ~ 32236122 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00044354
TTTTCTGAACGCAGCGAGTGTGTTCGCAGATGCTGCTGAGGCTGGAGACTGTTGCACAAGTCAAAAAGTGTAGGCTGCTTGCAAGTGGGTGAGGTGTCTTTTCACCCACACTCAGTACCATTCATCTCTTGCTCTTCATTCTTCTGTTCTGTCTAACTGAGTGACACGCGGACTATGAAAAATATGACTTTCCGTCGCGTAAAGAAGCTGAATTCAAGCGATCCGGACAGCGGGTCGTTGTGTCACGACAGTGGAGATATTTACTTCACGTCCTCTAAATCGGACAGCTGTGGGATTGTGAATCGTGGACCCTCAAACTCCACCGAGGTTTACAATTATAAAACCCTTGCTTACTCAGGAGGAACCCTACCGAGGAACTTCAAAAAGAACGGTGGGCTGCAGAAATGGAAGCCCCTCGCGCAGTCTCCAGAACCGCAAAGAAAAACTGTGATCCTGGAGAAGAAAGAAGAGGAGTCCTTTGGCTTCGAGATCCAGACATACGGGCTTCATCACCAAAGTGAGAACTCCGTGGAGATGTGCACCTTTGTTTGCAAAGTCCACGAAGACAGTCCCGCTCTACTCGCAGGCCTTAAAGTTGgtGACACGATTGCCAGCGTGAACGACACTTCAGTTGACGGATTTCGCCATAAAGAAATCGTCCAGCTCATTAAATCATCAGGAAACAACATTAGGCTAGAAACCGTCTACAGCGACTCTATAAGAAAAGCAGAACTGGAAGCTCGTCTGCAGTATCTAAAGCAAACCCTGCATGAGAAATGGGATGAGTACAGGTCTCTGATGGTACAAGAGCAGCGGCTCGTGCATGGTATCGTGATGAGTGATGTGGCGATGTACGAGTCTCTGGAATCAGCTGGTGTTTATGGGAGTCTGGGAGCTCCGAGTCCTGCAGCGTTGCGAGCGTTACGGGGCACCGACAGCACCAGCAGCAGCGTCAGCCATCTGAGCGCCGCCACGGCTGAAGACGACCCGCTCTACCAGACCTGCATCTTCAACAACACCAGCAATGACCAGATCCATGCTAAACAGGAGAACACTCGCCCACGTCTCATTCGACCCGCCAGCGAGCTCTTCACCactgctaaaaccagcctgacccgCAGTGCCAGCACACGCAGCTACTTGAGgcctccatcatcatcatcatcagcatcatcatcagCAGTGCCAAACGGAGAAAAACAGCAGTGCGGAGGCTTCAGCAGCCTGCAGCGCAAACCAAAACAGAAGAGCTTCAGGCGGAGGCTGCTCAAGTACATCCCCGGACTCAACAGACCTCTGGAGGAGGAGGAAAGCAAACTGTGAGACACGAGAAATGCATCCAAAGACAGACCAAAACTGGAGGAGAAACCAAAGAAcagttgactgactgattgagaGCCAGAGAATGCTAGTCATTTAGCTCTTCTGAAAACGAATGCTTTGTtactttactcaccctcagggtCTTCTAGGAGGCTTCAGTGGAATATTAAAGAAGAGTTTTAATCTTTTAGACAATGGCTACCTGCACTTTAAGAGTCTTCAGACCATCTTAAATGCACTGAGGACTGTTTGCTTAGTGGAATAAAGGTAATAACGTATATCTTTTGTTCTTGCACAAACCAATCACTTTGCTGCAAAATATCTGTCTATCATTAATCATGGGGGttaattttgttggtttgttggtttgtttttgacTCCAAAAGTGCAAGTATTTCCTGAATGATCAAACGAGCGCAGTTTCAGCCGAGCGTTTGCTTTAATATTCCACTGAATTAAACTATAATGATGTCCTGATGGGGAGTAAACTAACATAACCATCCCTTTAACCATCCCTTTAAGTTTGGCATTTCATCGCCTTTGCTTTTGAGTCTGATTACAAGATGCAGACAAACACTGTTCAGGcataaactttcatttttagacTTGAAATATTCAGGTTTGTCTAAAATGCTGAAAGTAAATGTGGATGTGTTTCTGCTggaatattgtttaaaataaatcagtaatccATAATATAACAGCTAACAAGACTATATATGGCGGGAAAAAATAGACTCTAACAACAATAGCCAGCGTGTCTTAATCACTTTGTCAGCTACTTGTTAACATTCTCTAACTTGCCTTCATGGTTTGATTTTTGCATCTAAACCAAGAGGTGATGTGttgtacatattttgttgatgtttaagttatttatttaatgtttattttcagcttttgTGAATTAGTTTTGTTATTTGAAGATGTACAAAATGAAggattgtttgttgtttttgttaaattgCTACTTGTTCATTTCTATTTGAAAATACTCCGGTCCTGAAGGATATTTAATAAGTGCCTTGTTGGCATGTATGTGTAAATAACTTctgttttttctatattttttaaaaattcagattGAAAATAAAAGGTTGATAATT

Function

symbol description
grasp general receptor for phosphoinositides 1-associated scaffold protein

GO: NA

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

Ensembl:

ensembl_id ENSDARG00000000588

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00044354 True 2429 mRNA 0.43 8 32199588 32236122

Neighbor

gene id symbol gene type direction distance location
XLOC_022485 nr4a1 coding downstream 5191 32149269 ~ 32194397 (-)
XLOC_022482 NA coding downstream 58268 32111318 ~ 32141320 (-)
XLOC_022484 CU469363.1 coding downstream 59630 32139843 ~ 32139958 (-)
XLOC_022483 rprm3 coding downstream 69974 32128399 ~ 32129614 (-)
XLOC_022481 letmd1 coding downstream 99482 32079046 ~ 32100106 (-)
XLOC_022487 dgkaa coding upstream 2215 32238337 ~ 32304754 (-)
XLOC_022488 rnf41 coding upstream 72692 32308814 ~ 32334208 (-)
XLOC_022489 NA coding upstream 111877 32347999 ~ 32352704 (-)
XLOC_022490 ankrd52a coding upstream 125963 32362085 ~ 32390742 (-)
XLOC_022491 si:ch211-66i15.4 coding upstream 164684 32400806 ~ 32404029 (-)
XLOC_022480 NA non-coding downstream 191792 32006905 ~ 32007796 (-)
XLOC_022474 BX927365.2 non-coding downstream 444720 31754752 ~ 31754868 (-)
XLOC_022472 BX927365.1 non-coding downstream 481878 31693368 ~ 31717710 (-)
XLOC_022492 NA non-coding upstream 172656 32408778 ~ 32570699 (-)
XLOC_022493 NA non-coding upstream 222733 32458855 ~ 32461920 (-)
XLOC_022494 NA non-coding upstream 254044 32490166 ~ 32496144 (-)
XLOC_022495 NA non-coding upstream 260189 32496311 ~ 32536550 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000001_13405095_13420029 GRASP coding CI01000001 null 13405015 ~ 13420561 (-)