XLOC_022833 (trpa1b)


Basic Information

Item Value
gene id XLOC_022833
gene name trpa1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 13635108 ~ 13715761 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00045385
CTGAAAGAAGCCACAAGACAATGGAAAgtgcacttatttttttttaaatacttttaatttttttctccagTTCTGGGAAATGGTAATTCATGAGCAACCACAGGCCATTGTCCAGACATTTACGTTTACATTACCCATAAGCATTTGAAGTTTAGAAATCTCATGCTAAATTAGCATGGCCCTTAATGAACGCATCAGATGACATTACCTCTGAGTGAGAGCCACTGTAACTGGATCTCCTTCAACCAACACTATAAAACCAGCTTCATACTGAGTgacggagagagaaagagagagcaagaCCACAGCACACAACTGCTCAACACACACATCAGCACATCCTCAGTCACTACGCTCACCAAATGCAGTTTGGAAAGGAGTTAGTGAGGCGAAACAGCTTCTACAAATGTGTGATAAACGAGGACGAAACGGAGGAGTCTGCAGATGTCTTTGAGTTGGCTTTCAAAGGAAAGGCTTCTGCCATCGATCGTCTGATCCAGAAAGGTCCAGAACACCTAAGCCTCAGGGATGAGAATGGAGCCAGTCTGCTGCACTATGCTTCAGCTGGAGGAAACCTGGATATCATTCGGCTCATTGTTTCCATTGTGGGCCCTGAGGTGCTGAATGTGCAGGATGAGCAGGGCCGAACTCCTCTGCACTGGGCTGTGGAGCAGGATCAACAACAGAGCTGCGCTGTACTGCTGGATCTGGGTGCTGACCCCAACATCCTCAACAATGCCCTGATGGGCCCTCTGCACCTGGCTGTCACCAAACAATACAATCATCTAGCAGAGGTCCTTCTGTCTTGTGACAAAACCAATAGCAATCTGGAGGGGGATCTGGGAAACACCCCTGTCATGCTGGCCTGCTCCAATAACAACTGCCAAGCTCTCCAGATCCTGATCAAGCGCGGTGCCAAGATGTGTATTCAGAACAAGCTGGGTCACTATCCCATTCATACTGTTGCTTTCGCAGGTGCCAAAGAGGCCATGGAGATGGTATTGAAAATTGGAGAAGAACTTGGTGTATCATCTACATTGCACATTAATTATTTGGATAAGTCCAAAAGCACACCTCTTCATCTGGCTGTACGCGGAGGCAATATCGAGGTGATCAAACTCTGCATCTTGAAAGGAGCCAAAGTAGAACAACATCAGAGTGGCAAATGCACGGCCCTCCACTTTGCCTGCAGTCAGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACAGAAGATATCGTCAACATTCGGGATGGAGCCAATCGGACACCTTTGCATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTGCAGATtttaaaatcaaagaaaaaacagGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAGAGCACCGCCGTGAAGGAGATGTTGTCTGATGAGGATGTTGAAGGCTGCACTCCTCTGCACTACGCCTGCAAGCTTGGCATCCACGATTCGGTCAAAAATATGCTGGGTCTCAATATCTGCTTGGGTCAAAAGTCACGGGAGAAGAAATCAGCGCTTCACTTCGCTGCAGAATATGGGCGTATAAATACATGCCACCGGCTGCTGGAGACCCTCACAGACTCTAAAATGCTGAATGATTGGGATGAAAAGGGTCTGACGCCCCTCCATCTTGCTTCAAGGGCAGGACACGCTCAAGTAGTGGATCTGCTGCTTAGGAAGGGAGCACTGTTTCAAAGTGATTACAAGGGCTGGACCTGTTTACATCATGCAGCAGCTGAAGGATACACACAGACGATGAAAATCCTGCTGGCAGCCAATGTGAAACTACTAGATGAAAAAAATGAAGATGGGAACACAGCCCTTCATATAGCAGCACAAGCTGGACATGTAAGTGCTGTTTTGCTGTTATTGGACAGAGGAGCTGAAATCGCTCTCAACGATGCTGACAACTCTTTTTTGCATGAAGCTGTGCGGAATGAGAGAAGAGAAGTAGTGAACGCCACCATTGAACATGAGCGGTGTGATGAGTCAATGACGTCATTTAAAGCGAAATCCCGCTGTGTTGTGCTGGACATCATAGAGTTCCTCCCAGAATCTTTTCAGCACCTTTTGGACCAGTGTATTACAGAATCTGATCATGATGCCAATAGTCAGGATTATCATATCATGTACAATTTTCAATGGCTTCAGGCTCCCATACAGTTGAAGAAATATGctaaaacagacaaaacaaaagcaTTTCAACCACTGGCAGCATTGAATGCCATGGTGCGGTACAACCGTCTGGAGCTCCTCATTCACCCCTTGAGCCGAAAATACCTGGAGATGAAGTGGACGGCATATGGAAGCAAAGTTCATTTCCTAAACTTGGCGATATACCTGCTTGGATTGTTGCCCCTCACATACCTCATCCTCAATCTGAGACCCAGCCAGGACTTCTCCAAAGGCAATGGCACATCTGTCATCATGGTGCCCGTATCTTTTAGCGAGCAACAATATTTAATCTCCGTGTGTATAATCATGGTGATCGTCATGAATGTGTATTCGATTTGCAAAGAGGTGGTACAGTTGGCTCAGCAGCGAGTAAATTACTTCACAGATTTCTCAAACCCTGCGGACTGGAGTGCAGCTATTAGCGCTTTGGTTTTTGTTGTACCCATGTGCTGCAGTGTGGAGGCCACATGGCAATGGGAAGCTGGAGCTTATGCTATTCTGACTTCATGGATTGGCTTTCTGCTTTACTTTCAGAGATTTGAGCGGATTGGGATTTACGTGGTGATGTTTAATGGAATCGTACGGACCCTGGTGTGCATCATGGTTCTTTTTGTCTTCCTTTTGCTGGCTTTCGGCTTGGCTTTCTACGCTCTGATGCTCCACAGGCCGGAGTTCAGTTCCATCAGCCTAGCGTTAGCGCAAACGTTTGTGATGACAGTAGGAGAGCTAAACTACCAAAGCACATTTCTTAACTCCTATGAAGAAGGCCACATGGCTTTCCCAGCCATCACttatttagtttttgtgttttttgttcttCTCATGCCCATTCTTCTCATGAACCTAATGATTGGTTTGGCTGTAGGAGACATTGCAGAGGTACAGAGAAACGCAGAGCTGAAAAGGATTGCTATGCAGATAGATCTTCACACTGCCCTTGAGGAGAAACTACCTTACTGGTTCCTGAAGCGAGTGGACAAACCCTCTACCGTTGTCTATCCCAATAAATGCAAGAAAGTGCTTCTGGAGGCCTTGGTGCATGGTGAGATTCAGAACACAGTTCGAACTCGTCTAAACCTTTGCTCACGGAAGGAAGGGCTTTTGGAGAGAGAGCTGCACAAGCAGAAGAACAGGTTGAAAGAAATGTCGTGCATGCTGGAAAAACAGCATAACCTGTTGAAGCTGATTATCCAGAAGATGGAAATTACATCTGAAGCTGATGAATATGATGGTCCACAGAATCATGGAGCTCTAAAACAGCACACCTCATCCACCTCACAGAAATCAAAGTGGGTCCCGTTACTGCAAGCAATCAAGGCCAAGAAGTGACATCATAATGTACACATAAGCCATAATCAGCATTTTATTGTGATTTGATATGTTAGTTATAGTTTATAGTTAGTGTAGTTGTTTTTCCTCCCATCTTATGAactgtaaatgtataataatagtaTCATGATGTAGTTTAGAAGTTATAGCAATATTAATTTATTAGGAACAGTTATGGGTAATAACAGATTATGGATTATGTAATAAAACATTAAGTACTTGTAATTATACTAAAATTACCTAATTTATTAGTTCCTCTTGTTTATTCAATTGATTACATTTTAGCACAATGGTGGTAAAATATTCAGAATTCCTCAATCAGCCCTATTTTCTAATTTATGTCTTATGTCTGTTGTTCATTTAATGCAgcgaataaactttttttttttttttgccagataGACCTTTGGCAAAATTATCCTTAttcaagtctttttttaaattgtgtttatttgtaaataatgtattAGATTTCCATTTTGATGACTTAATATGATTATTGATTGGTTATAAAAAAATTTGGTAAAAAGTAATCCATTACTCAAAACAAGTAATGTAATCATGTAGATTAACTTGTTACTGTTgcaattttgtatgtttgtttcctGAATTACATCTTTACTTAATAGTTAGTAAATTATGAGGGtaatctctctctccctctctctcttgacttgtttactgttggttactaggttatcAATACTACAGTTAGCCCCTCTAATAACttcataaatatatacactgGATATCTcatacagaccctgagcatgcatcaatagtGCCGCCACATTTGCACTGTGCTCCcagcacaaatgtcattcaaccacactagtcaagactaaagccaatgtgaagatgccgGACTTTTGCTCTGTGTAAAGGTGTAGTTTtaagcaaattaagaaaacaaaaaagcatgcacagtggcctctcgcggatttgcaaaatgagcctgggttggataatACAATCAATTAGTGCACTGATCATAAGGAAGTAGCACAAATTCGCACTAAATaccaggcttatgctagtttggtTGAATAAAACCAGCAAactatgtaaatgaaatatgacaagacACCTTGGTGCCAGAAAcctgtattattgtcagctaagtgaaagagtcgttcataaTGAAGATTCCTTCACAAACGAATCGATCCCTctgttagaatgagaagtgaaagcaggagaggacacggattagatcaaatttaacagtgaagcaggataatacatttccatgcacacaaacacacactctctttgtTAGCAATACCCGTGCAGTCCCttatccatcgatgtagaaaagtgatgtaaaatgatagttttcaccataaaaaaaaaaaaaaaaaaaaaaaaaaaaaaatatatatatatatatatatatttgcatactgaccaccaggaaaattcccgatcatagatatatctatatatgtgtatatatctttcgctctggatggccagtccttcactgcaccttggtcccacatttatTTCAAAGGATCAGCACCCTGTACTAAGCGGCTCTATTGGCTCTATCCTTCCAATAAACCACAACAGGGTAGGCgtcatctaatgtaaatatatcTATGTAATAATTTGATGGAAACACACCCAATTCGTATTTGggattttttcaattttttctttgaaaaaaactcacttcatgGTTGGATGGAAACCCATCTATTGATAACTAGCTGGTCAGTAAATTTGTTATACGTAAATGTTGCAGCTACCTGAATGTTTCAATGAATTGAGCTGGGACAAATAATTTGACTCTTACATTGGTAAATTAATAAACTGTGCATATAGTTTAAAGAGCTAAAACATGGACTGACTACCAAATTCAGCTATACTGCGTTAGCAGCCTAAAAGTAATCAAAGGTAATCTGGTTATATAACCTAaattatgtaatcagattacattacaaactaatAACTAATTATGACTGATACGAGGCAGTATGGCACCGTTcgttttctcgcttaccagctgactgcttaccttcttatggaggcttttccactgttaccagtttttccCAGTAGCTCGACTTGTACATGGGCAGACTTGacacgcagagaggagttgactacaACTAGAGGTCTCGAGTTCAgtgaagagcagttccagaaagcaggtaagacaaaaacaaaaggcaaaaaagaaaataaattagtaaataacaaggtgagaatgtggaaaatcagaaaatctgaaaacatggtaaaaaagtttttctggattgctttataaaacactgcagttggTTTAGGGAAAAGGGTGAGTGG
>TCONS_00045386
ggagagagaaagagagagcaagaCCACAGCACACAACTGCTCAACACACACATCAGCACATCCTCAGTCACTACGCTCACCAAATGCAGTTTGGAAAGGAGTTAGTGAGGCGAAACAGCTTCTACAAATGTGTGATAAACGAGGACGAAACGGAGGAGTCTGCAGATGTCTTTGAGTTGGCTTTCAAAGGAAAGGCTTCTGCCATCGATCGTCTGATCCAGAAAGGTCCAGAACACCTAAGCCTCAGGGATGAGAATGGAGCCAGTCTGCTGCACTATGCTTCAGCTGGAGGAAACCTGGATATCATTCGGCTCATTGTTTCCATTGTGGGCCCTGAGGTGCTGAATGTGCAGGATGAGCAGGGCCGAACTCCTCTGCACTGGGCTGTGGAGCAGGATCAACAACAGAGCTGCGCTGTACTGCTGGATCTGGGTGCTGACCCCAACATCCTCAACAATGCCCTGATGGGCCCTCTGCACCTGGCTGTCACCAAACAATACAATCATCTAGCAGAGGTCCTTCTGTCTTGTGACAAAACCAATAGCAATCTGGAGGGGGATCTGGGAAACACCCCTGTCATGCTGGCCTGCTCCAATAACAACTGCCAAGCTCTCCAGATCCTGATCAAGCGCGGTGCCAAGATGTGTATTCAGAACAAGCTGGGTCACTATCCCATTCATACTGTTGCTTTCGCAGGTGCCAAAGAGGCCATGGAGATGGTATTGAAAATTGGAGAAGAACTTGGTGTATCATCTACATTGCACATTAATTATTTGGATAAGTCCAAAAGCACACCTCTTCATCTGGCTGTACGCGGAGGCAATATCGAGGTGATCAAACTCTGCATCTTGAAAGGAGCCAAAGTAGAACAACATCAGAGTGGCAAATGCACGGCCCTCCACTTTGCCTGCAGTCAGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACAGAAGATATCGTCAACATTCGGGATGGAGCCAATCGGACACCTTTGCATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAGCCTAATACACTGTCATTGGATCTCATTTGTCTTGGAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTGCAGATtttaaaatcaaagaaaaaacagGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAGAGCACCGCCGTGAAGGAGATGTTGTCTGATGAGGATGTTGAAGGCTGCACTCCTCTGCACTACGCCTGCAAGCTTGGCATCCACGATTCGGTCAAAAATATGCTGGGTCTCAATATCTGCTTGGGTCAAAAGTCACGGGAGAAGAAATCAGCGCTTCACTTCGCTGCAGAATATGGGCGTATAAATACATGCCACCGGCTGCTGGAGACCCTCACAGACTCTAAAATGCTGAATGATTGGGATGAAAAGGGTCTGACGCCCCTCCATCTTGCTTCAAGGGCAGGACACGCTCAAGTAGTGGATCTGCTGCTTAGGAAGGGAGCACTGTTTCAAAGTGATTACAAGGGCTGGACCTGTTTACATCATGCAGCAGCTGAAGGATACACACAGACGATGAAAATCCTGCTGGCAGCCAATGTGAAACTACTAGATGAAAAAAATGAAGATGGGAACACAGCCCTTCATATAGCAGCACAAGCTGGACATGTAAGTGCTGTTTTGCTGTTATTGGACAGAGGAGCTGAAATCGCTCTCAACGATGCTGACAACTCTTTTTTGCATGAAGCTGTGCGGAATGAGAGAAGAGAAGTAGTGAACGCCACCATTGAACATGAGCGGTGTGATGAGTCAATGACGTCATTTAAAGCGAAATCCCGCTGTGTTGTGCTGGACATCATAGAGTTCCTCCCAGAATCTTTTCAGCACCTTTTGGACCAGTGTATTACAGAATCTGATCATGATGCCAATAGTCAGGATTATCATATCATGTACAATTTTCAATGGCTTCAGGCTCCCATACAGTTGAAGAAATATGctaaaacagacaaaacaaaagcaTTTCAACCACTGGCAGCATTGAATGCCATGGTGCGGTACAACCGTCTGGAGCTCCTCATTCACCCCTTGAGCCGAAAATACCTGGAGATGAAGTGGACGGCATATGGAAGCAAAGTTCATTTCCTAAACTTGGCGATATACCTGCTTGGATTGTTGCCCCTCACATACCTCATCCTCAATCTGAGACCCAGCCAGGACTTCTCCAAAGGCAATGGCACATCTGTCATCATGGTGCCCGTATCTTTTAGCGAGCAACAATATTTAATCTCCGTGTGTATAATCATGGTGATCGTCATGAATGTGTATTCGATTTGCAAAGAGGTGGTACAGTTGGCTCAGCAGCGAGTAAATTACTTCACAGATTTCTCAAACCCTGCGGACTGGAGTGCAGCTATTAGCGCTTTGGTTTTTGTTGTACCCATGTGCTGCAGTGTGGAGGCCACATGGCAATGGGAAGCTGGAGCTTATGCTATTCTGACTTCATGGATTGGCTTTCTGCTTTACTTTCAGAGATTTGAGCGGATTGGGATTTACGTGGTGATGTTTAATGGAATCGTACGGACCCTGGTGTGCATCATGGTTCTTTTTGTCTTCCTTTTGCTGGCTTTCGGCTTGGCTTTCTACGCTCTGATGCTCCACAGGCCGGAGTTCAGTTCCATCAGCCTAGCGTTAGCGCAAACGTTTGTGATGACAGTAGGAGAGCTAAACTACCAAAGCACATTTCTTAACTCCTATGAAGAAGGCCACATGGCTTTCCCAGCCATCACttatttagtttttgtgttttttgttcttCTCATGCCCATTCTTCTCATGAACCTAATGATTGGTTTGGCTGTAGGAGACATTGCAGAGGTACAGAGAAACGCAGAGCTGAAAAGGATTGCTATGCAGATAGATCTTCACACTGCCCTTGAGGAGAAACTACCTTACTGGTTCCTGAAGCGAGTGGACAAACCCTCTACCGTTGTCTATCCCAATAAATGCAAGAAAGTGCTTCTGGAGGCCTTGGTGCATGGTGAGATTCAGAACACAGTTCGAACTCGTCTAAACCTTTGCTCACGGAAGGAAGGGCTTTTGGAGAGAGAGCTGCACAAGCAGAAGAACAGGTTGAAAGAAATGTCGTGCATGCTGGAAAAACAGCATAACCTGTTGAAGCTGATTATCCAGAAGATGGAAATTACATCTGAAGCTGATGAATATGATGGTCCACAGAATCATGGAGCTCTAAAACAGCACACCTCATCCACCTCACAGAAATCAAAGTGGGTCCCGTTACTGCAAGCAATCAAGGCCAAGAAGTGACATCATAATGTACACATAAGCCATAATCAGCATTTTATTGTGATTTGATATGTTAGTTATAGTTTATAGTTAGTGTAGTTGTTTTTCCTCCCATCTTATGAactgtaaatgtataataatagtaTCATGATGTAGTTTAGAAGTTATAGCAATATTAATTTATTAGGAACAGTTATGGGTAATAACAGATTATGGATTATGTAATAAAACATTAAGTACTTGTAATTATACTAAAATTACCTAATTTATTAGTTCCTCTTGTTTATTCAATTGATTACATTTTAGCACAATGGTGGTAAAATATTCAGAATTCCTCAATCAGCCCTATTTTCTAATTTATGTCTTATGTCTGTTGTTCATTTAATGCAgcgaataaactttttttttttttttgccagataGACCTTTGGCAAAATTATCCTTAttcaagtctttttttaaattgtgtttatttgtaaataatgtattAGATTTCCATTTTGATGACTTAATATGATTATTGATTGGTTATAAAAAAATTTGGTAAAAAGTAATCCATTACTCAAAACAAGTAATGTAATCATGTAGATTAACTTGTTACTGTTgcaattttgtatgtttgtttcctGAATTACATCTTTACTTAATAGTTAGTAAATTATGAGGGtaatctct
>TCONS_00045387
ATGCAGTTTGGAAAGGAGTTAGTGAGGCGAAACAGCTTCTACAAATGTGTGATAAACGAGGACGAAACGGAGGAGTCTGCAGATGTCTTTGAGTTGGCTTTCAAAGGAAAGGCTTCTGCCATCGATCGTCTGATCCAGAAAGGTCCAGAACACCTAAGCCTCAGGGATGAGAATGGAGCCAGTCTGCTGCACTATGCTTCAGCTGGAGGAAACCTGGATATCATTCGGCTCATTGTTTCCATTGTGGGCCCTGAGGTGCTGAATGTGCAGGATGAGCAGGGCCGAACTCCTCTGCACTGGGCTGTGGAGCAGGATCAACAACAGAGCTGCGCTGTACTGCTGGATCTGGGTGCTGACCCCAACATCCTCAACAATGCCCTGATGGGCCCTCTGCACCTGGCTGTCACCAAACAATACAATCATCTAGCAGAGGTCCTTCTGTCTTGTGACAAAACCAATAGCAATCTGGAGGGGGATCTGGGAAACACCCCTGTCATGCTGGCCTGCTCCAATAACAACTGCCAAGCTCTCCAGATCCTGATCAAGCGCGGTGCCAAGATGTGTATTCAGAACAAGCTGGGTCACTATCCCATTCATACTGTTGCTTTCGCAGGTGCCAAAGAGGCCATGGAGATGGTATTGAAAATTGGAGAAGAACTTGGTGTATCATCTACATTGCACATTAATTATTTGGATAAGTCCAAAAGCACACCTCTTCATCTGGCTGTACGCGGAGGCAATATCGAGGTGATCAAACTCTGCATCTTGAAAGGAGCCAAAGTAGAACAACATCAGAGTGGCAAATGCACGGCCCTCCACTTTGCCTGCAGTCAGGGTTCTCTGGAGGCTGTCAAAATCATGCTTTCCTCTTACAACAGAACAGAAGATATCGTCAACATTCGGGATGGAGCCAATCGGACACCTTTGCATAGAGCCACGCTGTTTGATCACGTTGAGTTGGCTGAATATCTTATTTCAAAGGGAGCAGAAATTGACTCTATTGACTGTAAGGGACTGTCTCCGCTTCTGCTCGCCTCCAGCTGCAGCGCTTGGAAAACAGTTGCATATCTGTTGTCCATTGGTGCAGATtttaaaatcaaagaaaaaacagGTCGCAACTTCCTCCACTTTGTTATTCTTCAACCTAAAGGCCTAAAAAATCTTCCTGAGACGGTTTTGCAGAGCACCGCCGTGAAGGAGATGTTGTCTGATGAGGATGTTGAAGGCTGCACTCCTCTGCACTACGCCTGCAAGCTTGGCATCCACGATTCGGTCAAAAATATGCTGGGTCTCAATATCTGCTTGGGTCAAAAGTCACGGGAGAAGAAATCAGCGCTTCACTTCGCTGCAGAATATGGGCGTATAAATACATGCCACCGGCTGCTGGAGACCCTCACAGACTCTAAAATGCTGAATGATTGGGATGAAAAGGGTCTGACGCCCCTCCATCTTGCTTCAAGGGCAGGACACGCTCAAGTAGTGGATCTGCTGCTTAGGAAGGGAGCACTGTTTCAAAGTGATTACAAGGGCTGGACCTGTTTACATCATGCAGCAGCTGAAGGATACACACAGACGATGAAAATCCTGCTGGCAGCCAATGTGAAACTACTAGATGAAAAAAATGAAGATGGGAACACAGCCCTTCATATAGCAGCACAAGCTGGACATGTAAGTGCTGTTTTGCTGTTATTGGACAGAGGAGCTGAAATCGCTCTCAACGATGCTGACAACTCTTTTTTGCATGAAGCTGTGCGGAATGAGAGAAGAGAAGTAGTGAACGCCACCATTGAACATGAGCGGTGTGATGAGTCAATGACGTCATTTAAAGCGAAATCCCGCTGTGTTGTGCTGGACATCATAGAGTTCCTCCCAGAATCTTTTCAGCACCTTTTGGACCAGTGTATTACAGAATCTGATCATGATGCCAATAGTCAGGATTATCATATCATGTACAATTTTCAATGGCTTCAGGCTCCCATACAGTTGAAGAAATATGctaaaacagacaaaacaaaagcaTTTCAACCACTGGCAGCATTGAATGCCATGGTGCGGTACAACCGTCTGGAGCTCCTCATTCACCCCTTGAGCCGAAAATACCTGGAGATGAAGTGGACGGCATATGGAAGCAAAGTTCATTTCCTAAACTTGGCGATATACCTGCTTGGATTGTTGCCCCTCACATACCTCATCCTCAATCTGAGACCCAGCCAGGACTTCTCCAAAGGCAATGGCACATCTGTCATCATGGTGCCCGTATCTTTTAGCGAGCAACAATATTTAATCTCCGTGTGTATAATCATGGTGATCGTCATGAATGTGTATTCGATTTGCAAAGAGGTGGTACAGTTGGCTCAGCAGCGAGTAAATTACTTCACAGATTTCTCAAACCCTGCGGACTGGAGTGCAGCTATTAGCGCTTTGGTTTTTGTTGTACCCATGTGCTGCAGTGTGGAGGCCACATGGCAATGGGAAGCTGGAGCTTATGCTATTCTGACTTCATGGATTGGCTTTCTGCTTTACTTTCAGAGATTTGAGCGGATTGGGATTTACGTGGTGATGTTTAATGGAATCGTACGGACCCTGGTGTGCATCATGGTTCTTTTTGTCTTCCTTTTGCTGGCTTTCGGCTTGGCTTTCTACGCTCTGATGCTCCACAGGCCGGAGTTCAGTTCCATCAGCCTAGCGTTAGCGCAAACGTTTGTGATGACAGTAGGAGAGCTAAACTACCAAAGCACATTTCTTAACTCCTATGAAGAAGGCCACATGGCTTTCCCAGCCATCACttatttagtttttgtgttttttgttcttCTCATGCCCATTCTTCTCATGAACCTAATGATTGGTTTGGCTGTAGGAGACATTGCAGAGGTACAGAGAAACGCAGAGCTGAAAAGGATTGCTATGCAGATAGATCTTCACACTGCCCTTGAGGAGAAACTACCTTACTGGTTCCTGAAGCGAGTGGACAAACCCTCTACCGTTGTCTATCCCAATAAATGCAAGAAAGTGCTTCTGGAGGCCTTGGTGCATGGTGAGATTCAGAACACAGTTCGAACTCGTCTAAACCTTTGCTCACGGAAGGAAGGGCTTTTGGAGAGAGAGCTGCACAAGCAGAAGAACAGGTTGAAAGAAATGTCGTGCATGCTGGAAAAACAGCATAACCTGTTGAAGCTGATTATCCAGAAGATGGAAATTACATCTGAAGCTGATGAATATGATGGTCCACAGAATCATGGAGCTCTAAAACAGCACACCTCATCCACCTCACAGAAATCAAAGTGGGTCCCGTTACTGCAAGCAATCAAGGCCAAGAAGTGA

Function

symbol description
trpa1b Enables calcium-release channel activity. Acts upstream of or within chemosensory behavior; detection of chemical stimulus involved in sensory perception of pain; and ion transmembrane transport. Predicted to be integral component of membrane. Is expressed in Rohon-Beard neurons and cranial ganglion. Human ortholog(s) of this gene implicated in familial episodic pain syndrome 1. Orthologous to human TRPA1 (transient receptor potential cation channel subfamily A member 1).

GO:

id name namespace
GO:0050907 detection of chemical stimulus involved in sensory perception biological_process
GO:0034220 ion transmembrane transport biological_process
GO:0050968 detection of chemical stimulus involved in sensory perception of pain biological_process
GO:0050974 detection of mechanical stimulus involved in sensory perception biological_process
GO:0007606 sensory perception of chemical stimulus biological_process
GO:0055085 transmembrane transport biological_process
GO:0007635 chemosensory behavior biological_process
GO:0006811 ion transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015267 channel activity molecular_function
GO:0015276 ligand-gated ion channel activity molecular_function
GO:0015278 calcium-release channel activity molecular_function
GO:0005216 ion channel activity molecular_function
GO:0008381 mechanosensitive ion channel activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050106-1 Enables calcium-release channel activity. Acts upstream of or within chemosensory behavior; detection of chemical stimulus involved in sensory perception of pain; and ion transmembrane transport. Predicted to be integral component of membrane. Is expressed in Rohon-Beard neurons and cranial ganglion. Human ortholog(s) of this gene implicated in familial episodic pain syndrome 1. Orthologous to human TRPA1 (transient receptor potential cation channel subfamily A member 1).

Ensembl:

ensembl_id ENSDARG00000031875

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00045385 False 5993 mRNA 0.41 28 13635108 13715761
TCONS_00045386 False 4100 mRNA 0.43 28 13635387 13714108
TCONS_00045387 True 3324 mRNA 0.47 27 13642126 13713454

Neighbor

gene id symbol gene type direction distance location
XLOC_022832 NA coding upstream 34836 13355261 ~ 13600272 (+)
XLOC_022831 SBSPON coding upstream 297959 13316737 ~ 13337149 (+)
XLOC_022830 si:ch211-171b20.3 coding upstream 353977 13277573 ~ 13281131 (+)
XLOC_022829 stau2 coding upstream 395051 13017586 ~ 13240057 (+)
XLOC_022828 flj11011l coding upstream 619084 12989727 ~ 13016024 (+)
XLOC_022834 msc coding downstream 19855 13735616 ~ 13741624 (+)
XLOC_022835 NA coding downstream 42939 13758700 ~ 13764804 (+)
XLOC_022836 eya1 coding downstream 153331 13869092 ~ 14015459 (+)
XLOC_022837 NA coding downstream 339335 14055096 ~ 14078636 (+)
XLOC_022838 tram1 coding downstream 499070 14214831 ~ 14234824 (+)
XLOC_022824 NA non-coding upstream 780916 12853386 ~ 12854192 (+)
XLOC_022820 NA non-coding upstream 1342573 12291736 ~ 12292535 (+)
XLOC_022817 CU929203.1 non-coding upstream 1502663 12129726 ~ 12132445 (+)
XLOC_022816 NA non-coding upstream 1532970 12095530 ~ 12102138 (+)
XLOC_022840 BX248495.1 non-coding downstream 635139 14350900 ~ 14351020 (+)
XLOC_022845 NA non-coding downstream 866483 14582244 ~ 14585809 (+)
XLOC_022846 BX294113.1 non-coding downstream 908070 14623831 ~ 14636303 (+)

Expression


Co-expression Network