tpst2 (LOC106568446)


Basic Information

Item Value
gene id tpst2
gene name LOC106568446
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048569.1
NCBI id CM023223.2
chromosome length 100798064
location 21176148 ~ 21182983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021602072.2
attactgcaactctttgtgatgtactgaacacgactggttactcgcatcaatgcctctgtctcgtcatttaacattcaaacagTGACTGAGCATTGCAACCAAAAGCAGTCACAAGAAGCATGCAAAAATAGATGCTATACCCTCAGAACTGGAGCAAGTATATGAGTTATTTGTTCCTAAAGGTGCACTATGCATAAATTGctctgtcatttcctggttgctcaAATTCTAATAggtcacctaatttcagtttgtgaccaaacaagcaagtataatatagagaatcattgtaccatctaaacaacTGTGAAACATATTTTCGCTaatcaaaaatattgtattttcagctgtttgaagttgGCGTACAAAACTGAAAGCAAAAGACACAAAAACTCAAGAacagggaagcatagaaatagtgcacatagaataacagatctaccacttcttagacatGCTTTAAATGAGAATGAAAGATATATAACTCgcttttctatgtgaatttggtaggGTCGCCCCAAAAGtgatattgcagctttaattatGGGTTAGTGTCAGGGGAGATTTGTCATTCGAATTAAATTAAAGTCATCATGGAAGTTGCAAtggtcccactgggcacacactagttgaatcaacattgtttccaagtCATTGCAATgtaattacgttgaaccaacgtggaattgAAGTTGAATTGACATTGTGCCCAGTGGGGTGACTTCTGTCCTTTCTAGCATGGAGATAAAAACAGAATAAGGCTTACTGGGTCAGAGAAATCAGTCCTGACAATgcttcaacctctcctctctttactaaCTACTTCAATCTTCCTTCCGTCCCCATCAACTCACTCTGTTCTGCACCGGGCTTCACACTCAAACTAGAACACCACAGTTCAGCTTCCTCTTCCGTCCGTTAAGAAAGTACCTCTCTACCTTTACTTCAACAAGGTCAGTCTCACTGAAACTTAAAATCTGTTTCTACAAAAAAAAACTGGTTAAAATAGCAGCACACACAGTTGGCCTCCTGCCCATGACCAAGAGACCATGACCAAGAGACCATGACTAAGCACAACCATCTCCATCAGTGATGCGTGTGTCAGCACGGAGGGTGTTAACAGGGCTCCTGATCCTGGGTGGAATCTCCACCCTGACCCAGTTCCTGCGTTTCTGTCTACCCTGCCGGCAGCCATCCCAGGGTGCGGGCGAACCTGTGACCGTGCTGGTCCGGGACGGGTGGAGGGTTAGTTCTGACGTTCCCCTGGTGTTTGTGGGAGGGGTGCCTCGCTCCGGGACCACCCTGATGAGGGCCATGCTGGACGCCCACCCTGCGGTGCGGTGTGGGGAGGAGACGAGGGTCGTACCCAGGATACTGGGCCTTATGCTGGGCTGGGCTGCTGAGAAGGAGGGGGTCAGCACCAAGGTCCTGGACCGAGCGGTCACTGCCTTCCTCCTTCAAATCATAGCAGGACATGGGGAGCCAGCACCTCTACTCTGCAATAAAGACCCCTTTACTTTGAAGAGCGCTAAGTACCTCGCTCATCTTTTTCCCAAcTCTAAGTTCCTGCTGATGCTGAGAGATGGCCGAGCGGCGGTGTACTCTATGATTTCGCGTCGCGTGACGATCGGTGGATTTGACCTCTCCAGCTATAGGGACTGCCTGGCCAAGTGGAGCCGAGCCACACAGGCCATGCTGACACAGTgcactcaggtgggcaGTAAGAGGTGCCTGGCTGTGAGGTATGAGAGGCTGGTCCTCCACCCTCGCTCCACCCTGCAGACAGTGCTAAAGTTCCTGGGTCTGCCGTGGCACGAGGGGGTTCTGCACCATGAAGAGGCTATAGGAAAACCTGGAGGAGTCTCACTGTCAAAAATGGAACGGTCCACAGACCAGGTGATGAGGCCAGTGAACTTAGACGCTCTGACTCGGTGGGTAGGTCACATGCCCCCAGACGTAATGGCAGACATGGACGCTATCGCCCCCATGCTGGGGAGACTAGGCTACGACCCCAGAGCCAACCCACCTAACTATGGACAGTCTGACCCACAGTTCCTCAACAACACACAAAGGcTTCTGAGGGGAGACTTTAAAACTCCTGTAGCAAGCCTACATCAGAAAGGACGTCCTCTGATGTCCATGAAAGGTTCACAGACAGAGAGGTGACAGGGTCAGCGCCTGGAACAACGGTCACCCCTGACCTATGACCCCTGATTATCCTCTCAGGGAAGACAACAGCATCAACCAAAAGGCTGGTGGCTAAGCACCAAGCACAGTCAGAGGGCATAACCATGCATGTGCTCTAGACCTCATTGATAGGAAGAAGTGAAGTACAATGGAGAAAAGTATATTatattgtttttttacatttccaAAATGTGTTTACTTACCTGAATAGGTTCTCCCACTGCCTCCATTTTTTTGGGGTccttacaaaaataaaataatggccAATCTTCACTATATTTTTGGTGATATCAAAGTGCCGCCAGCAGCTATGTGGATGAATGGAGACAAGGGAAAAAATAGGCTCTTTGAGAATCCAATAATTAATTACTTACACAATCGTCTCTAATATGTAGGCTCAGCATTCCTGAACAATCCAATTACAAGTCAGAATGTTAAATAAACTTATTTTTAAGTTACTTTACCTGTTGTCTGCTGATTTTGTCCTTATGTAGGAGGTAATCTGAGACAAAATATCCACAAACGTTATTAGCCAGACTTTCAGTACGCTGGTCTGTATATGGTTGGTATTTCTGGATAAAATGTTCAATACTGATGTAATTCGCAGGTTACAAACACTTGCACAATATGACTGAGCCTAACCAAACCACAGCTGATTGAGAGGTAACTGAGCCTAACCAAACCCCAGCTGATTGAGAGGTAACTGAGCCTAACAAAACCACAGCTGATTGCGATGCATGCTTCAGTCGATTATGTTCGGTTACATTCGGCTATTGCTGACATATTGTGCATCACATGCTATGCGTaaagagattgaaaatacaaGTGACAGAACCCACAAGCACCACAAAAAGTTGTCTAAACAACCCTTTGTTGTGGATAGCCCATCCCCACCTCCTACCACCAAAAGGACCAACAGCATGTACAACCGGTAAAGTAAGTGTAAATATAattgtattcaacattctggcttgtaaagACTATTGAGTCATTTTGTGGGCGACTTCGATCATACTGATGATCCATGAGGTAACCATAGTAACAGTctgatgtttaaaaaaaacatcagaCTGTCACCAGAGCAGTTTAGAAGGTGTTGCAGAGCTCTGCTACCCTATCCCAACAGGCCTGACGTTATACATCGGGTTAGGGCAGGATAATACCTGTTTTTAAATAACTAGGGTATGGGTAGGGCTCAGGTATTACTAAATTGATCACTAACATTTTGTAGATAAGTAATTTGCTcaatgctctgctctgctgtgcagTGCAGTCATATATAAGATCATAACAGAGGTACGTAAAACCTCGTCAAATATAAAACAGGTTTATTTCCCAAAAAGTATAATGTAACACAACTAACtgctctctcatgtctcttcattcGTTGACCAGAGCCAGATATACTTTGAGGAGATGAGAAACTCCATTTGAATCGTTGCCCATGCTACGTCAGTGGGCCGTGCGGTGCATTCTGGGCAATTCGAGGACAAGGAGAGCTCTCCTTCAAGGAGTGGATGTAGTCAATTGGGTGCTAGCTGAGGAGCAGCTAATGGATTTACTAACCCAGGAAGATATTTCTGATTTCGGGTTTCGGGAAGGGCTGGATTGGGCCTTAAATTTGGCAGCCGCAATCgggcctgggtagggtagggcctgaacGTCACAGGCATGGGTAAAGGCTCAGGCTTAAAATTCATGCCGTGAAGGGCTCAAATTGTGACGTTTGACTTTACCATTTAAATATAAATTGCAGACTGTCGGCCACACTTGATAACTTGAAAACGGTGAGGCACATAACACACCCCTTCTACTGGCAATTGGGGGGGAGGGTTCTTGAAATGTAACATCCAATCAAAATCAGCGGACAATTCAAACCGTCTTTGCAATACAAAATTCTCCAGACCTCCAAGAGAGGCGTGACAATGATGTGATTTTGGAGGTATGGCAACCATAAACCAGTAGACGTATTCCTATGGAAATGTCCTGATGGCGCATGAAGCCGGAAGTATTTGAATTTGAAGCATGCCATATAGCTGAATGGGGCTGAATGGCACCAAAAGATTGATAAGACTCATGGTGAATGTGGACATAACTAGCAAAGGATCACGGTCGATGTAATCATTTTCATCCTGCCTGGGAGAGTCAACCTTAATGTCTATGGCAAGGAGGCGCAATCCACCTCATAGCCTGCAGGCCCGTGATTGATATGTCagcacgtggtcctgtgtgacaacaaatgtagtagtcagaatggataaCTATTTAACTAAATATCTTGATTTGTCGCAAACTTTAAAATAATTCATAGTGGGCATCGAACTTCATCATAATAATCTAATTTTATAGCCCAAAACGAGCGTCCCTCTCAAAAAACTGTCAGTTTTGGCGATTGAAGCCGACCAGTCGAGCTTGTGACTTCACGTTCCAGATAGGACACTGTGGTCCTCATTGCAACACGAGACTAGCTAGATATAGGCTGGTTGATGTTAGGATAAGGAGTCTTTTATAAGGAGGTGGGAAGTGGGGAATGACTGTGCCTGTTTGTGTAGAATTGATCCATGCTGTAAATAATTTGTTTCTATTAAATCAATGTTATGACCTAAAATAAACTGTTCAATCCCTGTTA
>XM_036977029.1
gttcattactgcaactctttgtgatgtactgaacacgactggttactcgcatcaatgcctctgtctcgtcatttaacattcaaacagTGACTGAGCATTGCAACCAAAAGCAGTCACAAGAAGCATGCAAAAATAGATGCTATACCCTCAGAACTGGAGCAAGTATATGAGTTATTTGTTCCTAAAGGTGCACTATGCATAAATTGctctgtcatttcctggttgctcaAATTCTAATAggtcacctaatttcagtttgtgaccaaacaagcaagtataatatagagaatcattgtaccatctaaacaacTGTGAAACATATTTTCGCTaatcaaaaatattgtattttcagctgtttgaagttgGCGTACAAAACTGAAAGCAAAAGACACAAAAACTCAAGAacagggaagcatagaaatagtgcacatagaataacagatctaccacttcttagacatGCTTTAAATGAGAATGAAAGATATATAACTCgcttttctatgtgaatttggtaggGTCGCCCCAAAAGtgatattgcagctttaattatGGGTTAGTGTCAGGGGAGATTTGTCATTCGAATTAAATTAAAGTCATCATGGAAGTTGCAAtggtcccactgggcacacactagttgaatcaacattgtttccaagtCATTGCAATgtaattacgttgaaccaacgtggaattgAAGTTGAATTGACATTGTGCCCAGTGGGGTGACTTCTGTCCTTTCTAGCATGGAGATAAAAACAGAATAAGGCTTACTGGGTCAGAGAAATCAGTCCTGACAATgcttcaacctctcctctctttactaaCTACTTCAATCTTCCTTCCGTCCCCATCAACTCACTCTGTTCTGCACCGGGCTTCACACTCAAACTAGAACACCACAGTTCAGCTTCCTCTTCCGTCCGTTAAGAAAGTACCTCTCTACCTTTACTTCAACAAGTGATGCGTGTGTCAGCACGGAGGGTGTTAACAGGGCTCCTGATCCTGGGTGGAATCTCCACCCTGACCCAGTTCCTGCGTTTCTGTCTACCCTGCCGGCAGCCATCCCAGGGTGCGGGCGAACCTGTGACCGTGCTGGTCCGGGACGGGTGGAGGGTTAGTTCTGACGTTCCCCTGGTGTTTGTGGGAGGGGTGCCTCGCTCCGGGACCACCCTGATGAGGGCCATGCTGGACGCCCACCCTGCGGTGCGGTGTGGGGAGGAGACGAGGGTCGTACCCAGGATACTGGGCCTTATGCTGGGCTGGGCTGCTGAGAAGGAGGGGGTCAGCACCAAGGTCCTGGACCGAGCGGTCACTGCCTTCCTCCTTCAAATCATAGCAGGACATGGGGAGCCAGCACCTCTACTCTGCAATAAAGACCCCTTTACTTTGAAGAGCGCTAAGTACCTCGCTCATCTTTTTCCCAAcTCTAAGTTCCTGCTGATGCTGAGAGATGGCCGAGCGGCGGTGTACTCTATGATTTCGCGTCGCGTGACGATCGGTGGATTTGACCTCTCCAGCTATAGGGACTGCCTGGCCAAGTGGAGCCGAGCCACACAGGCCATGCTGACACAGTgcactcaggtgggcaGTAAGAGGTGCCTGGCTGTGAGGTATGAGAGGCTGGTCCTCCACCCTCGCTCCACCCTGCAGACAGTGCTAAAGTTCCTGGGTCTGCCGTGGCACGAGGGGGTTCTGCACCATGAAGAGGCTATAGGAAAACCTGGAGGAGTCTCACTGTCAAAAATGGAACGGTCCACAGACCAGGTGATGAGGCCAGTGAACTTAGACGCTCTGACTCGGTGGGTAGGTCACATGCCCCCAGACGTAATGGCAGACATGGACGCTATCGCCCCCATGCTGGGGAGACTAGGCTACGACCCCAGAGCCAACCCACCTAACTATGGACAGTCTGACCCACAGTTCCTCAACAACACACAAAGGcTTCTGAGGGGAGACTTTAAAACTCCTGTAGCAAGCCTACATCAGAAAGGACGTCCTCTGATGTCCATGAAAGGTTCACAGACAGAGAGGTGACAGGGTCAGCGCCTGGAACAACGGTCACCCCTGACCTATGACCCCTGATTATCCTCTCAGGGAAGACAACAGCATCAACCAAAAGGCTGGTGGCTAAGCACCAAGCACAGTCAGAGGGCATAACCATGCATGTGCTCTAGACCTCATTGATAGGAAGAAGTGAAGTACAATGGAGAAAAGTATATTatattgtttttttacatttccaAAATGTGTTTACTTACCTGAATAGGTTCTCCCACTGCCTCCATTTTTTTGGGGTccttacaaaaataaaataatggccAATCTTCACTATA

Function

NR:

description
protein-tyrosine sulfotransferase 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021602072.2 False 4817 mRNA 0.45 8 21176148 21182979
XM_036977029.1 True 2333 mRNA 0.48 9 21178499 21182983

Neighbor

gene id symbol gene type direction distance location
LOC110523403 ubb coding downstream 557 21172644 ~ 21175591 (-)
LOC110522820 LOC105889199 coding downstream 13654 21160281 ~ 21162494 (-)
LOC110523399 LOC106568557 coding downstream 157182 21007681 ~ 21018966 (-)
LOC110523394 LOC100194676 coding downstream 324924 20843391 ~ 20851224 (-)
LOC110523392 NA coding downstream 1124306 20044243 ~ 20051842 (-)
LOC110522821 LOC106568453 coding upstream 704 21183687 ~ 21271783 (-)
LOC110522822 myo18b coding upstream 107183 21290166 ~ 21353241 (-)
grk3 LOC106568375 coding upstream 178822 21361805 ~ 21441880 (-)
LOC118964573 NA coding upstream 189642 21372625 ~ 21375057 (-)
LOC110523405 LOC106568369 coding upstream 277838 21460821 ~ 21464192 (-)
G378064 NA non-coding downstream 4222 21171276 ~ 21171926 (-)
G378065 NA non-coding downstream 6228 21167715 ~ 21169920 (-)
G378062 NA non-coding downstream 9061 21166883 ~ 21167087 (-)
G378061 NA non-coding downstream 9283 21166613 ~ 21166865 (-)
G378059 NA non-coding downstream 10052 21165731 ~ 21166096 (-)
G378104 NA non-coding upstream 55452 21238435 ~ 21239793 (-)
G378070 NA non-coding upstream 82583 21265566 ~ 21268240 (-)
G378124 NA non-coding upstream 94668 21277651 ~ 21292814 (-)
G378156 NA non-coding upstream 196606 21379589 ~ 21380165 (-)
G377991 NA other downstream 146365 21029458 ~ 21029783 (-)
G377809 LOC106568602 other downstream 471008 20704613 ~ 20705140 (-)
G377800 NA other downstream 481440 20694096 ~ 20694708 (-)
G374786 NA other downstream 2616981 18558140 ~ 18559167 (-)
G374189 NA other downstream 3172978 18002820 ~ 18003170 (-)
G378359 NA other upstream 608679 21791662 ~ 21791993 (-)
LOC110523434 LOC106567989 other upstream 994282 22177265 ~ 22179322 (-)
jmy LOC106568093 other upstream 1616717 22799696 ~ 22859199 (-)
LOC110522831 LOC106563032 other upstream 2364217 23488916 ~ 23556681 (-)
G380610 LOC106567829 other upstream 2526815 23709798 ~ 23711891 (-)

Expression


Co-expression Network