XLOC_000231 (si:dkey-192k22.2)


Basic Information

Item Value
gene id XLOC_000231
gene name si:dkey-192k22.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 18550864 ~ 18563321 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000382
GTGAAGTTGCATCATAATGTCCTTTACCATGACGAGATCAGGTGCCTTCAAACTAAGCATCCTTTTGTTCATCACATTCCTCCTGTGCCTCCCAGAGTTATTCCCAAACATATCTCAAATTGAGTTCCTCTGTGAGCCTTTCGACTTTTGCACGTCTGAAAGCAATGCACAGCTGTGTGGTCTTTCTGACCTTGCATGTGCCACAGAAACTATAAACACCAGCGGTCCACACAGACAGGACGGCTGGTATGCCTGTGCATCTCAAATGGATCTGAAGCTTCTCCAAAACAACACTTCACAGTCAGGAGAGCATGTGATGGCCGTTCTGACCATGAAAGCAGCCAATCTCTCAGTGTGGAACTACAGTGTGTTTGCTTTTCTCAACAACACTGATCTATACGCTAAAGCCCACGATGAGCAGACCCTCTTCTACTGCAATCTTCCACCAGACAACAGCAAATGTCCAGTGTTAAAGGATGAGGTAAAGTGCCAAGCAACCAGCAGCAGTTTCCTGTTTTACTATCATGAGCACAACGTAACTGCAAGCCCTGCTGAATTACCAAATACGCAAGCAAAAAGAGTGTGGTTGGCTTTGGTGCTGACTGTGGTTGTGGTAACTATTCTGAGTGTGGGCTTCCTGATCATCAAGAGCTGCCATCTTTATCATAGAAAATCCAAAATGGTGAGATTTTTGCCTCTTTCAGCCGGTAGACGTCCGCTCAAAAAGCCGAGCAAGCAAAAACAGAATT

Function

symbol description
si:dkey-192k22.2 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-090313-219 Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000095111

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000382 True 749 mRNA 0.46 6 18550864 18563321

Neighbor

gene id symbol gene type direction distance location
XLOC_000230 NA coding upstream 186993 18355746 ~ 18363871 (+)
XLOC_000229 CR392335.1 coding upstream 235719 18234470 ~ 18315145 (+)
XLOC_000228 NA coding upstream 381764 18165117 ~ 18169100 (+)
XLOC_000227 NA coding upstream 580580 17966114 ~ 17970284 (+)
XLOC_000226 cyp4v8 coding upstream 638219 17900306 ~ 17912645 (+)
XLOC_000232 slc25a51a coding downstream 248358 18811679 ~ 18816806 (+)
XLOC_000233 NA coding downstream 265851 18829172 ~ 18833443 (+)
XLOC_000234 rnf38 coding downstream 299739 18863060 ~ 18933671 (+)
XLOC_000235 limch1a coding downstream 402429 18965750 ~ 19066327 (+)
XLOC_000236 exosc9 coding downstream 520180 19083501 ~ 19092155 (+)
XLOC_000224 CR774194.1 non-coding upstream 688936 17858380 ~ 17861928 (+)
XLOC_000218 CR377220.1 non-coding upstream 1782055 16768683 ~ 16768809 (+)
XLOC_000238 NA non-coding downstream 549876 19113197 ~ 19159285 (+)
XLOC_000239 NA non-coding downstream 689706 19253027 ~ 19264970 (+)
XLOC_000247 BX323590.2 non-coding downstream 1142378 19705699 ~ 19705832 (+)
XLOC_000250 NA non-coding downstream 1245120 19808441 ~ 19821195 (+)

Expression


Co-expression Network