XLOC_000224 (CR774194.1)


Basic Information

Item Value
gene id XLOC_000224
gene name CR774194.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 17858380 ~ 17861928 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000377
CTCCCTTTCCTCTTGGGTCAGTGGCTCTCGTACGGAGCTAGAGAGCTATTGAAAAAGCATTGCGGTAAAACTGTCTCTTTACACATGACGAAACGCTTCTCCGTGTCAGCTCCGGGAGGAGGAGGAGATGAAAACACGTTCGTTTTGCATACTCAATCCGACGCGACGATTGCGCGCGAGAAAGCGAGGATGAGCACGTCGAGAACGCGAAGGGCAAGTGTTTAATAGAGACTTCATCCAGACATCATCCAATCGTCGCTTGTTTCTCAGGGAAGAGGAGTACTTTATAGCACAGCCTATAGAGTGTGCGCGCTCATGTGTGAGATGGAGAGCAGCGCCGCGTATTGGTCCCTCGCAGGTTTTCAGTAGCCATGGCAACCAGTCAGAATACTTCAGTAATCAGTGCGCGGGCTCAGGGGAGATGCTCAGGTCACCTCTCTGGCATTCAAGGGCAAACATACCGCACTGaaaacttcaaaatatcttcaagtTTGATGAAaGGTCTAGCCATGGTCTGGTGAAATTCTGAAAGACAGTAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095697

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000377 True 539 processed_transcript 0.50 2 17858380 17861928

Neighbor

gene id symbol gene type direction distance location
XLOC_000223 ankrd37 coding upstream 159607 17695426 ~ 17698773 (+)
XLOC_000222 slc25a4 coding upstream 179291 17676745 ~ 17679089 (+)
XLOC_000221 helt coding upstream 263335 17593392 ~ 17595045 (+)
XLOC_000220 casp3a coding upstream 322073 17527342 ~ 17536307 (+)
XLOC_000219 fat1a coding upstream 333458 17376922 ~ 17524922 (+)
XLOC_000225 tlr3 coding downstream 31016 17892944 ~ 17898227 (+)
XLOC_000226 cyp4v8 coding downstream 38378 17900306 ~ 17912645 (+)
XLOC_000227 NA coding downstream 104186 17966114 ~ 17970284 (+)
XLOC_000228 NA coding downstream 303189 18165117 ~ 18169100 (+)
XLOC_000229 CR392335.1 coding downstream 372542 18234470 ~ 18315145 (+)
XLOC_000218 CR377220.1 non-coding upstream 1089571 16768683 ~ 16768809 (+)
XLOC_000217 NA non-coding upstream 1184254 16672089 ~ 16674126 (+)
XLOC_000213 CT573256.2 non-coding upstream 1399639 16458525 ~ 16458741 (+)
XLOC_000211 CU633160.1 non-coding upstream 1696160 16162104 ~ 16162220 (+)
XLOC_000209 NA non-coding upstream 2422055 15422226 ~ 15436325 (+)
XLOC_000230 NA non-coding downstream 493818 18355746 ~ 18363871 (+)
XLOC_000233 NA non-coding downstream 967244 18829172 ~ 18833443 (+)
XLOC_000238 NA non-coding downstream 1251269 19113197 ~ 19159285 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000300_06039087_06039798 NA coding CI01000300 null 6038932 ~ 6040870 (-)