XLOC_002390 (taar19m)


Basic Information

Item Value
gene id XLOC_002390
gene name taar19m
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40690411 ~ 40691433 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004511
AACAAACTCCTAACAGGAGGAGACTCACTCATGGCCTACGAGACAGAGGATCAGGAGACTCAATACTGCTTTCCTAACATCAACTCATCATGTGTCAAGGAGAAACGCTCCATTCGTGAATATATCATCATGTATCTGTTTTCTTCATTGCTGTCGGTATGGATTGTGTTTCTGAACCTGCtggtgatcatctccatctctcacttcaaGAAGCTTCACACTCCAACCAACATGATTATTCTCTCTCTGGCTGTGGCTGATCTGCTTATTGGACTGATTGTGATGCCCTTACAGGCCATCAAACAGATTGAGACGTGTTGGTACTTTGGAGAGTCTTTCTGTGGAatcaatttaatattaattggGCTTATTTTCTCAGCATCTTTCAGTAATTTGGTTTTAATTGCTGTTGATCGTTATGTGGCTGTGTGTCACCCTTTACTGTACCCACGGAAGATAACCACGGCTAAAATGTTAATGAGTATCCTTCTGAGCTGGCTTTACTACTCCGGTTATAACACTGGTCTTGTAATTAATAATGGATATGCTGACACGTCATACAGAACAGACATGTGTTATGGAGAGTGTACAATCATAATGAGTTTTGGTTGGATCCTCACTGAtatgttcatgttttttatttttccctgtctCATAATGATCACTTTTTATGTGAGGATTTTCTATGTCGTTCATCAGCAAGTGAAGGTTATGAACTCTCTGATGAAGGGTGGTAAATGTGTAACAGAGGGTTCAGTGAAGAGGAAATCTGAGAGTAAAGCTGCTCTGACTTTAGGAATCATTGTGACTGTTTATCTGCTTTGCTatatcccatactatatctgtactttaTCTGTAAACTCTGTCACAGCTATTAATGTTTTAGGATGGATTGTGTATGCTAACTCAGGTGTGAATCCTCtagtttatgctttattttacccCTGGTTTAAAAAGACAGCTAAAATTATCTTAACTCTGAAAATATTTGAGCCGGCATCTTCTCTGATCAATATTTTTAAG

Function

symbol description
taar19m Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0001594 trace-amine receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-091116-30 Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000112669

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004511 True 1023 mRNA 0.39 1 40690411 40691433

Neighbor

gene id symbol gene type direction distance location
XLOC_002389 taar19h coding upstream 4622 40684758 ~ 40685789 (+)
XLOC_002388 taar19o coding upstream 11904 40677476 ~ 40678507 (+)
XLOC_002387 taar19p coding upstream 17806 40670847 ~ 40672605 (+)
XLOC_002386 taar19u coding upstream 24207 40665182 ~ 40666204 (+)
XLOC_002385 taar19l coding upstream 28644 40660772 ~ 40661767 (+)
XLOC_002391 taar19n coding downstream 8878 40700311 ~ 40728693 (+)
XLOC_002392 si:ch211-139n6.10 coding downstream 14667 40706100 ~ 40707131 (+)
XLOC_002393 si:ch211-139n6.11 coding downstream 19853 40711286 ~ 40712317 (+)
XLOC_002394 taar19q coding downstream 30823 40722256 ~ 40723287 (+)
XLOC_002395 taar19i coding downstream 40401 40731834 ~ 40732895 (+)
XLOC_002380 CR396590.1 non-coding upstream 50607 40638776 ~ 40639804 (+)
XLOC_002376 CR396590.3 non-coding upstream 80458 40609461 ~ 40609953 (+)
XLOC_002375 CR396590.7 non-coding upstream 81694 40607701 ~ 40608717 (+)
XLOC_002373 CR396590.8 non-coding upstream 89909 40599935 ~ 40600502 (+)
XLOC_002367 CR396590.5 non-coding upstream 135280 40554917 ~ 40555131 (+)
XLOC_002398 BX001050.2 non-coding downstream 56440 40747873 ~ 40748898 (+)
XLOC_002406 CU571179.1 non-coding downstream 248231 40939664 ~ 40964812 (+)
XLOC_002414 BX005006.1 non-coding downstream 1148486 41839919 ~ 41840033 (+)
XLOC_002417 NA non-coding downstream 1291564 41982997 ~ 41986283 (+)
XLOC_002424 NA non-coding downstream 1779183 42470616 ~ 42477259 (+)

Expression


Co-expression Network