XLOC_030474


Basic Information

Item Value
gene id XLOC_030474
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 55134605 ~ 55140137 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061464
TTTTCTCTAGAACTCACAGATGTACCATCGATCCAGTGGGAGATTCAAGACCATATTGGAGATGACCATAAGGCCAAGACTGTAGCTGGACAGAGAAGAGTGGTTGTCATGTGGGAGTATCCGATCAGTGAGGCTGTGGCTTACTACAATGTGACACATCAGGGCCTTTAACAATGCTGGATCATCTCCTGTTTCCAGTATAATCATTGAACGAATGGATGAGTGGCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061464 True 228 lncRNA 0.45 3 55134605 55140137

Neighbor

gene id symbol gene type direction distance location
XLOC_030473 CU207241.1 coding upstream 11385 55119510 ~ 55123220 (+)
XLOC_030472 NA coding upstream 60405 55065782 ~ 55074200 (+)
XLOC_030471 cd180 coding upstream 193601 54938634 ~ 54941004 (+)
XLOC_030470 NA coding upstream 422950 54711023 ~ 54711655 (+)
XLOC_030469 pmchl coding upstream 448895 54685175 ~ 54685710 (+)
XLOC_030475 NA coding downstream 6496 55146633 ~ 55154249 (+)
XLOC_030476 tmc2a coding downstream 81456 55221593 ~ 55251994 (+)
XLOC_030477 pcsk5a coding downstream 125137 55265274 ~ 55349429 (+)
XLOC_030478 ntrk2b coding downstream 486556 55626693 ~ 55689656 (+)
XLOC_030479 BX323563.1 coding downstream 531329 55671466 ~ 55671582 (+)
XLOC_030464 NA non-coding upstream 651738 54481759 ~ 54482867 (+)
XLOC_030460 CR450749.2 non-coding upstream 1026091 54106010 ~ 54108514 (+)
XLOC_030480 NA non-coding downstream 577588 55717725 ~ 55719138 (+)
XLOC_030481 NA non-coding downstream 764996 55905133 ~ 55906713 (+)
XLOC_030485 NA non-coding downstream 953793 56093930 ~ 56094196 (+)

Expression


Co-expression Network