XLOC_030488 (CR753837.2)


Basic Information

Item Value
gene id XLOC_030488
gene name CR753837.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 56246736 ~ 56248735 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059549
ACTTCAAACAAACTTTATTGTTATTGTCAAGGacagatatatgtaataatttcgctggtaaggtgaataaaaaacaatattgtaatcaatatcacgtttgcactggttcggttcagcactcgagcggctctgaatcgtattgaaccgaattgaaccgtttgctcgggaattatttgatcacacgtattcacaagcacattcagcaatatgcaattagtgtataattagtgtataaatgcgtgtggccaagcagtataacgaaatagtaatgaatcatatacaaaaaggaatcggttttaggcggattcgattctttactgttcactaaggagccaattcatagaaccgaacggacacgactcgacaTGCAGGCcacaacactgagatgaaggcgaagtcaccatgaaaagttaaacgtttaccgttaagctacagtaattgatgttgaaaaactgatgctaccaatcactcctcacttgatttatcaaggtaatgttgatgtcttcctcattttgattagatttttaaatgtcaagttgttcacagatttgttgtgaggagtttcatgtacaacctcttttgcTTCTTCCAGGAGTTCCTAAGATaaaaaaatctggtgttaaaacagccacggctatgctatttgcctaccaagtgctgagtaaatattagacaaacaatttttctataactgttgtctttgtgtttattagcaattttactgggcgtatgtgtttttttttttcaaacagcctggaaactgtaagtttagttcaatatgttattttatgctattcatttttgtcttaacatggattgcatgttgaagctatcgttttatagtgggaaaatgtaaaagagaataactgaatacaatggcataatgattctgcttgttcacagaaggtacttgatttagttttcctcaagcgacacatcagtttttatgactattgcttgacacttgaattgaagggacagttcaccccaaaatgaaaataatagcatctttggcatcctccacttgtttcaaaatagttatatatttattttgttccgttggactagaaac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094314

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059549 True 1072 processed_transcript 0.35 3 56246736 56248735

Neighbor

gene id symbol gene type direction distance location
XLOC_030487 NA coding upstream 60792 56184865 ~ 56185944 (+)
XLOC_030486 mrm1 coding upstream 120967 56119975 ~ 56125769 (+)
XLOC_030485 NA coding upstream 152540 56093930 ~ 56094196 (+)
XLOC_030484 fzd9a coding upstream 218960 56023186 ~ 56027776 (+)
XLOC_030483 fkbp6 coding upstream 256963 55984270 ~ 55989773 (+)
XLOC_030489 CR753837.1 coding downstream 7453 56256188 ~ 56258166 (+)
XLOC_030490 BX255908.1 coding downstream 9696 56258431 ~ 56259830 (+)
XLOC_030491 lhx1b coding downstream 19701 56268436 ~ 56274174 (+)
XLOC_030492 aatf coding downstream 29131 56277866 ~ 56306081 (+)
XLOC_030493 NA coding downstream 184917 56433652 ~ 56438669 (+)
XLOC_030481 NA non-coding upstream 340023 55905133 ~ 55906713 (+)
XLOC_030480 NA non-coding upstream 527598 55717725 ~ 55719138 (+)
XLOC_030479 BX323563.1 non-coding upstream 575154 55671466 ~ 55671582 (+)
XLOC_030494 NA non-coding downstream 225875 56474610 ~ 56525693 (+)
XLOC_030496 NA non-coding downstream 772853 57021588 ~ 57025500 (+)

Expression


Co-expression Network