XLOC_030490 (BX255908.1)


Basic Information

Item Value
gene id XLOC_030490
gene name BX255908.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 56258431 ~ 56259830 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059551
tgtgggtgaacatactacctggatgtccaacaaaggctgcaccagagctcatttgatagcacatattctgtcctgtctacatctctgatgacctggaagtgcttcgacatcagatcatcatcatgctgctgccctttttcactgtccctttccacatcatttggccttcatcatttcctgtcttgtagcagtattttcacctgtttttaaaattgtaataatttttgatgcattaattgttgactggctttaatgatcaattgtttattagtgttctgttgctctgttatattgaattattgctactgttttagcatggtttacacaataaacctttattgtgaagttaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099832

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059551 True 351 lncRNA 0.37 2 56258431 56259830

Neighbor

gene id symbol gene type direction distance location
XLOC_030489 CR753837.1 coding upstream 265 56256188 ~ 56258166 (+)
XLOC_030488 CR753837.2 coding upstream 9696 56246736 ~ 56248735 (+)
XLOC_030487 NA coding upstream 72487 56184865 ~ 56185944 (+)
XLOC_030486 mrm1 coding upstream 132662 56119975 ~ 56125769 (+)
XLOC_030485 NA coding upstream 164235 56093930 ~ 56094196 (+)
XLOC_030491 lhx1b coding downstream 8606 56268436 ~ 56274174 (+)
XLOC_030492 aatf coding downstream 18036 56277866 ~ 56306081 (+)
XLOC_030493 NA coding downstream 173822 56433652 ~ 56438669 (+)
XLOC_030494 NA coding downstream 214780 56474610 ~ 56525693 (+)
XLOC_030495 tmem232 coding downstream 705347 56965177 ~ 56997795 (+)
XLOC_030481 NA non-coding upstream 351718 55905133 ~ 55906713 (+)
XLOC_030496 NA non-coding downstream 761758 57021588 ~ 57025500 (+)
XLOC_030498 NA non-coding downstream 978888 57238718 ~ 57241553 (+)
XLOC_030502 NA non-coding downstream 1220184 57480014 ~ 57485614 (+)

Expression


Co-expression Network