XLOC_030496


Basic Information

Item Value
gene id XLOC_030496
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 57021588 ~ 57025500 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061804
CAGAGATCCTCTTCTCCAGCAGCAGGCGGAAGGAGTTGGCTGTGATCTTGTTGTCCAGCACTCCCTGTCCCAACCCTCGATTGTCATCCTGATTGAGCCTGCGGTCCATTATCACCTCCAACTGACCGCTTTTAAGGCTGGCCGCTCCAAGCGACTGTGCAGTGAGCAGCGAGAGTCTGGCGCTGGAGTCCTGCAGGTAAAGCATGCTGGTCATGGGGTAGAAGTTTGCCTGCAGGGGGAGTTTAGCCATGGTTTTCCTCGGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061804 True 263 lncRNA 0.57 2 57021588 57025500

Neighbor

gene id symbol gene type direction distance location
XLOC_030495 tmem232 coding upstream 23793 56965177 ~ 56997795 (+)
XLOC_030494 NA coding upstream 495895 56474610 ~ 56525693 (+)
XLOC_030493 NA coding upstream 582919 56433652 ~ 56438669 (+)
XLOC_030492 aatf coding upstream 715507 56277866 ~ 56306081 (+)
XLOC_030491 lhx1b coding upstream 747414 56268436 ~ 56274174 (+)
XLOC_030497 pja2 coding downstream 184737 57210237 ~ 57234118 (+)
XLOC_030498 NA coding downstream 213218 57238718 ~ 57241553 (+)
XLOC_030499 atp6v1g1 coding downstream 294613 57320113 ~ 57325557 (+)
XLOC_030500 slc31a1 coding downstream 303035 57328535 ~ 57354915 (+)
XLOC_030501 prpf4 coding downstream 416771 57442271 ~ 57453791 (+)
XLOC_030490 BX255908.1 non-coding upstream 761758 56258431 ~ 56259830 (+)
XLOC_030489 CR753837.1 non-coding upstream 763422 56256188 ~ 56258166 (+)
XLOC_030488 CR753837.2 non-coding upstream 772853 56246736 ~ 56248735 (+)
XLOC_030502 NA non-coding downstream 454514 57480014 ~ 57485614 (+)
XLOC_030510 BX950179.1 non-coding downstream 1012272 58037772 ~ 58037886 (+)
XLOC_030511 FQ378020.1 non-coding downstream 1186661 58212161 ~ 58212284 (+)
XLOC_030514 NA non-coding downstream 1390564 58416064 ~ 58421500 (+)

Expression


Co-expression Network