XLOC_030487



Basic Information


Item Value
gene id XLOC_030487
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 56184865 ~ 56185944 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061795
GTGTAACCTGGCTTCTCCTCTTCAACCCCAGCCTTAAGATCTGGATTAACCCCCTACCCCTCATCACAATAGGGGCACATGTCCGCCTATCCACCACGGGCCCATTCAGACCTGCTTTACTCAGCGACTAATAAGGATTAGTGTTAATGAGACATAAGGAATTAAGTATGAATGAAGACCTCCTTAAGCAGTCATTCAGTGTATTCTGTGCCTCCTCATTCTCCTTCTGTCTCGCCTCTGTGTTTGAGCACAAGGTGTAATCCTCTTGAAAATCAAAGtaacacgTTGAAGCGAGGGGGCATGGCAGAGAGCcatgggaacggagtgaggccaccgcataagtggatacacctgcggtgcgcacctgcctcaaatcccacggaaggagctctggactataaaaggAGGAATGATGGCAGAGGAAGCTGAGAGAGGACCAGGTCCGGACATActgtattttacttttgctttcagtttgacggcagtctccgtaaggagctgccgtccgtttgttttggtttagactgcagtctccgtgaggagctg

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061795 True 546 lncRNA 0.50 2 56184865 56185944

Neighbor


gene id symbol gene type direction distance location
XLOC_030486 mrm1 coding upstream 59096 56119975 ~ 56125769 (+)
XLOC_030485 NA coding upstream 90669 56093930 ~ 56094196 (+)
XLOC_030484 fzd9a coding upstream 157089 56023186 ~ 56027776 (+)
XLOC_030483 fkbp6 coding upstream 195092 55984270 ~ 55989773 (+)
XLOC_030482 tmem150ab coding upstream 232737 55934129 ~ 55952128 (+)
XLOC_030488 CR753837.2 coding downstream 60792 56246736 ~ 56248735 (+)
XLOC_030489 CR753837.1 coding downstream 70244 56256188 ~ 56258166 (+)
XLOC_030490 BX255908.1 coding downstream 72487 56258431 ~ 56259830 (+)
XLOC_030491 lhx1b coding downstream 82492 56268436 ~ 56274174 (+)
XLOC_030492 aatf coding downstream 91922 56277866 ~ 56306081 (+)
XLOC_030481 NA non-coding upstream 278152 55905133 ~ 55906713 (+)
XLOC_030480 NA non-coding upstream 465727 55717725 ~ 55719138 (+)
XLOC_030479 BX323563.1 non-coding upstream 513283 55671466 ~ 55671582 (+)
XLOC_030475 NA non-coding upstream 1030616 55146633 ~ 55154249 (+)
XLOC_030493 NA non-coding downstream 247708 56433652 ~ 56438669 (+)
XLOC_030494 NA non-coding downstream 288666 56474610 ~ 56525693 (+)

Expression



Co-expression Network