XLOC_030482 (tmem150ab)


Basic Information

Item Value
gene id XLOC_030482
gene name tmem150ab
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 55934129 ~ 55952128 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059542
TCAGTTTGAGCTTGAGATGCAGCAGAAGCAGCATCCGCTCAGGAGCCGCGGGGCCTGCGATATTATTGGTTGCTGGCAATCATCGGGGGTCCAGATGTAGTTGCAGGAGAATCACGTTGCCCCCACTGATCCACATATCCCACACTGCATGGCTTCAATTGCTGGTGACTCGCAGCGTGTCTCCATTACCCCAGTCCTGCACACCCTCATGCTGGGGTCTCAGGCCTCTCACAGACTGACCAATGACTGCTTGGATTGTTCTGCCTGTCAGCCTGTCTGCCTTCTCCATCACGGGGATATGGATCGTTTACGCCATGGCTGTAATGAACCATCATGTATGTCCGGTTGAGAACTGGTCATACAATTTGACATGCACAGAGGAAACGGCTAAGAGGGGCTTCCCAAAGACCTGCTGTACCCTTCAAGACATCCCCCTTATCAGTAAATGTGGTTGCTATCCACCAGAGAGCTGTCTCTTCAGTTTGATAGGCAATGTTGGGGCCTTTATGGtggtCATGGTGTGCATGCTGCGATACGCTCAAGTGATTGAACACAGTCATCACTGCTGGACCAACACAAGTGCTTTGGTGTCCGGCTGCATCAATGCCCTTGGGTTGGTCATGGTGGGCAACTTCCAAGTGGATCATGCCAAGACGCTTCACTATGTTGGAGCAGGTGTAGCTTTCCCCGCAGGCTTGCTGTTTGTGTGTCTGCAGTGTGTTCTGACATACCGTATAGCAGAGACAGCACTGGACTACTGGATGGCTCATGTACGCGTGGCTCTCTCGGCTGGAGCTCTCGTATCACTTGTCCTCAGTGGTGTCTTCTTCGTGCATGAGAGTTTTGTTTTGCAGCATGCTGCAGCCATCTGTGAATGGGTCTTCACGGTTTTGGTCCTAGTGTATTACGGCACCTTTACTTATGAGTTTGGCACTGTCAACACTGACACCATGATGGCGGCCTTAATGAAACGCAGTCAACATCACCATCCAGGGTCATCGGTCATTATGGGGGGCATTAGTAAGGGTGTTGCAATGGGATGTGGCGCCCGTGGTCTAAAGTCACCCGGAGGCAGCAGCACTTCCACACACCTCAACTGCACACCAGAGAGCATCGCCATGCTTTAGGAGTTAACCACTAAAGCACTCGCTCAGACCTCAGCACATAGACTCTGAACTCTTCATCTGGCTCATGGATTTGAGAAAAACTGGTACAAGCAATACAGCGTTTACAGTGAGTTTGCAGACTTGCTAAATATAATCATAACAGTAACAGGTAAGGTATTTATCGTTCAAGTGTAAGATAACTCAAAGAGAGTCTCAGTAACCAGCAGAGATGATTCTTTCCCCATGAATCATGGGAACTTTGAGAGAAAGGATTTAAAACTGCAATAATTCATCTCCAAAGGCACATTCACACTGACCATGACAAAAAGTGTTTAGGGTTAACCTAATTTCCCATTGGTTGAGGAAATTAGGACATCTTGTAGAGTGCTGCTTGGAAGATGCATTTTTATAGCTGAAACCCATAAactatttagcattttaactCATCCAATTTTTTAATCCTAAGGTTATTTatgtgttattataattttttgtactTAATTTGTTTCGCTAATGTcatatgtattaaaaaaaaacaattcaagaaATA
>TCONS_00059543
AGTCATCACTGCTGGACCAACACAAGTGCTTTGGTGTCCGGCTGCATCAATGCCCTTGGGTTGGTCATGGTGGGCAACTTCCAAGTGGATCATGCCAAGACGCTTCACTATGTTGGAGCAGGTGTAGCTTTCCCCGCAGGCTTGCTGTTTGTGTGTCTGCAGTGTGTTCTGACATACCGTATAGCAGAGACAGCACTGGACTACTGGATGGCTCATGTACGCGTGGCTCTCTCGGCTGGAGCTCTCGTATCACTTGTCCTCAGTATCCTTACTAAAAATACTAATCACTATTTACAGTTTAGCATATCAGTATATACAGTCATGATCTAATACATGAAAATCAAATTTGTTTGAATACACTTGAACATGATGTTATTGGCATAAAACGCAGTGTGGCTAATTGGTTTTTAACAGAAGATTATAAAAGATTAAGTTTGGCAGTTGGGTTTTCACATTGCTAACATTTCAGTATTGGCCGTACTTCATCAAATGTCAAAGTTTGGCAAGTGAAAATCccagttttgttatttatttattcattcattcattttatttttggcttagtgtctttataaatcaggggttgccacagtggaatgaaccgccaacttattcagcatatgttttacacagcagatgcccttccagctgcaacccgtcactgggatACAGTTATGTTGTTatagcaaatatttttaaatatattttttggggggaactaaactaaactataaacataaatttaatttacacAATGGCATGTAGTCTTCAACTAGAGTATTTTTTGGTGGGca

Function

symbol description
tmem150ab Predicted to be involved in protein localization to plasma membrane. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM150A (transmembrane protein 150A).

GO:

id name namespace
GO:0010506 regulation of autophagy biological_process
GO:0005764 lysosome cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1576 Predicted to be involved in protein localization to plasma membrane. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human TMEM150A (transmembrane protein 150A).

Ensembl:

ensembl_id ENSDARG00000035184

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059542 False 1656 mRNA 0.46 8 55934129 55952128
TCONS_00059543 True 794 lncRNA 0.39 2 55945798 55946681

Neighbor

gene id symbol gene type direction distance location
XLOC_030481 NA coding upstream 27416 55905133 ~ 55906713 (+)
XLOC_030480 NA coding upstream 214991 55717725 ~ 55719138 (+)
XLOC_030478 ntrk2b coding upstream 244473 55626693 ~ 55689656 (+)
XLOC_030479 BX323563.1 coding upstream 262547 55671466 ~ 55671582 (+)
XLOC_030477 pcsk5a coding upstream 584700 55265274 ~ 55349429 (+)
XLOC_030483 fkbp6 coding downstream 32142 55984270 ~ 55989773 (+)
XLOC_030484 fzd9a coding downstream 71058 56023186 ~ 56027776 (+)
XLOC_030485 NA coding downstream 141802 56093930 ~ 56094196 (+)
XLOC_030486 mrm1 coding downstream 167847 56119975 ~ 56125769 (+)
XLOC_030487 NA coding downstream 232737 56184865 ~ 56185944 (+)
XLOC_030475 NA non-coding upstream 779880 55146633 ~ 55154249 (+)
XLOC_030474 NA non-coding upstream 793992 55134605 ~ 55140137 (+)
XLOC_030488 CR753837.2 non-coding downstream 294608 56246736 ~ 56248735 (+)
XLOC_030489 CR753837.1 non-coding downstream 304060 56256188 ~ 56258166 (+)
XLOC_030490 BX255908.1 non-coding downstream 306303 56258431 ~ 56259830 (+)

Expression


Co-expression Network