XLOC_030769 (mlxipl)


Basic Information

Item Value
gene id XLOC_030769
gene name mlxipl
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 3819190 ~ 3839285 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059896
CCTCCTCTCTCAGCTGAAAGTTTACCCCAGCCTTCCTCCTCTGTAAACCTCCCCGTACCCACTTACCCACGCCACACCATAAACCCCGACATGACCTTCAACCCCAACACCGAAACCTCCGATCCCAAGTTCAAAGGTCACCCAGAATACATGAGTGATTTCCAGCACCCTCTGCACCTCTCGTCCGGCATGCCTTCATACGGCCAGCAGGGGGCGTTCAGCAACACAGAGATGCCACAGGAAAACCCTTACCCAGCAGCCTGCCTCAGACCACGACACAGATATTCCTCCGGCCAATCACGGACCTGCTCGGCTGCCACGCCCACCGTCATCACCCACAAAGGCTCTACTATAACCGTCCCGCCAGCAGACGCTCAGCTCGGGCACGGATACTCCAGTGTTGGCGAAATATTTCCTCCGTCCTCCTGCATGTCTGTAAACTACCAGCCGATGCCCGCCGCTGGACTCCATCACTGCTTCTCTGTGCCGCAGCAGGTGGGCGGAGCTACAGGCAGAGGGAAGCACAAACAGAAGAGCGGAGGAGCCCCATTGGTTCCCAGAGTGATGACGTCATCCGTAACCCCACCCTCCCAGACCAGCTGCCTGGCCAATCTGCTCTCGTCCAGATCTCAAGAGCgAAAACCATCATTGAGTTTTGATGCTCCTGCAACCGTGTCAAAGGGACAAAGATCCACATCACCCATTCCTCCGCAGCCGAAGAGCAGCAGTCGGGAAGGATCACAAATTTCCCACAGTCTCCCCTGGGTCTCTGGTGTAATCCCACCGCTGTCCCCGTTACACTGCCAGACACCACTGTCAGGCCACGGTCACAGCGTTTCCTCGCAGAGCAGCACCATCTCTTCTCTTTTAACACAACAAACAGCGCTTCTCGTCCCCAAAACTGAGAAACTCTCCCCGGTGCAAATGCACACCAGCGACAGGAGCAGTTTAACTGTTAGTTTTCCAGGAAGCATGGGTCAGACATCACCTACCAGTGCAGCTGAGAAAAGCCCAGAGTCAAAGTTGGAGTCCTCACGAACAGACACACGACGGATCACACACATCTCTGCCGAACAGAAGAGACGGTTCAACATCAAGCTGGGGTTTGATACGTTACACAGTCTGGTGACGACTCTGAGCTCACAGCCCAGTATAAAGATCAGTAAAGCCACGACTTTGCAGAAAACGGCAGAGTACATCAGTAAGATGCAGCAGGAGAGAGCACAGCTTCATGAGGAGGCGCAGAGGCTGAGAGACCAGATCCTGGCACTCAATTCCGCCATCAATGTGTGTCAGCAGCAGCTCCCCGCTACAGGCGTTCCAATAACACGGCAGAGGTTTGACCACATGAGGGAGAAGTTCAGAGAATATGTGAGAGCTCAAACGCTGCAGAACTGGAAGTTCTGGATTTTCAGCATCATCATCGAGCCGCTGTTCGAGTCGTTTAACAGTATGGTTTCCACAGCCAGTGTTGATGATCTGTGTCGCAGCACGCTCTCCTGGCTGGACCAGCACTGCTCTCTGCCTACACTCAGACCCACTGTTTTGAGTTCACTTCGTCTGCTCAGCACTTCCACATCAATCCTTTCAGACCCAAGTTTGGTTCCTGAACAAGCCGTCCAGGCAGTCACTCACGGACATTCATCGCACAGCTACAGCCAATGACAGCACACGCTCTCAGAATGACAGCCAATCAATAAACTTTGTCCCGTAGATACAGCCAATGACAGCACATGCACTCAGAATGACAGCA

Function

symbol description
mlxipl Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000089107

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059896 True 1753 mRNA 0.54 10 3819190 3839285

Neighbor

gene id symbol gene type direction distance location
XLOC_030768 FO704648.1 coding downstream 134788 3683053 ~ 3684402 (-)
XLOC_030767 FO704648.2 coding downstream 148952 3660658 ~ 3670238 (-)
XLOC_030766 si:zfos-375h5.1 coding downstream 192080 3611498 ~ 3627110 (-)
XLOC_030765 hspb1 coding downstream 234375 3568016 ~ 3584815 (-)
XLOC_030764 NA coding downstream 264381 3553600 ~ 3554809 (-)
XLOC_030770 mlxipl coding upstream 23301 3862586 ~ 3889047 (-)
XLOC_030771 c1qbp coding upstream 75118 3914403 ~ 3927763 (-)
XLOC_030772 CU655870.1 coding upstream 96632 3935917 ~ 3936596 (-)
XLOC_030773 myo19 coding upstream 103872 3943157 ~ 3991655 (-)
XLOC_030774 si:ch211-283g2.1 coding upstream 311529 4150814 ~ 4204601 (-)
XLOC_030763 NA non-coding downstream 317355 3473865 ~ 3501835 (-)
XLOC_030761 CABZ01084961.1 non-coding downstream 388835 3311008 ~ 3430355 (-)
XLOC_030782 NA non-coding upstream 782145 4621430 ~ 4622063 (-)
XLOC_030783 FO834903.1 non-coding upstream 801174 4640459 ~ 4643289 (-)
XLOC_030784 NA non-coding upstream 830986 4670271 ~ 4673865 (-)
XLOC_030785 CU915770.1 non-coding upstream 846390 4685675 ~ 4697367 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000171_00608319_00641115 NA coding CI01000171 null 607794 ~ 641753 (-)
bowfin (Amia calva) AMCG00018770 mlxip,LOC107702943 coding CM030135.1 CM030135.1 20121209 ~ 20151726 (+)