G1193084


Basic Information

Item Value
gene id G1193084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 61000130 ~ 61001712 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1361136
TCAGTTTTGCCCTAGACCTGCACAGCTGTGTTGCAGTAGGCTTACGTTAGCACATCGCTTTAGTTGACAGACTCTAGAGGTCTGTGTTTGAAATGGCCCACTATTCCCTAGAGAACTACATTTGTCTCTGCAGTATATGGGGAATAGCAAGCGATTTGCCCCAGGTATCCACCCTACTGTGTTGCAGAGGTCTTCTAAAAAGACCCACAGCAGTCTGATAGCcatggcctggtcccagatctgtttgtgatgGCTTACCAGCTACTATAAGAGTTttagcaagacagcacaaacagatctgggaccaagctaCAGAGAATTGCCTCTACTTCATAATGCCACAAGAAACCTATAGAAACCTATAGCTCAAAAATGTCAACAGCCAAAAGTGAGCCAATTTAAATCACCACCATCATTATATAGCCAACAACACTTTCCACGATAAAGAATACTACATCGAAATAACGTCTTCTGAAGGTACCATGACAGCAAGGAAGGGACATTACTGCACCGCAACAAAACAGAACGATGAGATTAACGTGGACACTGGAAAGAAATGGTACACAAAGAATTTCAATGAACGAGTcgctaaataaaaaaatagatattCCCTTGCCCTCAACCAAAATGAAACAAGAAAATAATCAACAAAAAAATAGTTTGAACATGGGTACGTTCAGTTTGATCCAAGTCCATTTTTCATGTTTGGCTGTTTACCAGGAAACTAGCAAGGATGGCGTCTCGTGCTCTCAGTTCTCTCACTTTTCCTCTTTAAAAAAATAGATGTACTCGAGGATCATACAGCATATTCCAGAACTAAATTCAAATGATAAGAATCATAACTAGATCTTGTTtgctattttattttaaataatacCATACTTTGTTTTGCTGttgaagtatatatattttttgcatttaGTTGTGTATGCATATGAAGACGTTGGACAGTCTCCTCCCATCGTGACATTTAGTTGTGTATGCATATGAAGACGTTGGACAGTCTCCTCCCATCGTGACATTTAGTTGTGTATGCATATGAAGACGTTGGACAGTCTCCTCCCATCGTGACTGTATGGTAAATGCTTTTCAGTGGAAACGAGAGCACCATGAAACAATAATTCACAATTCAATACTGTAGTTTTGGGGGTTTGAGTCCCACTGTGCCCTCTTCCCTCCTACTTCCTCTCCACAGAACTGTCAATCACTCTCGACAAGGCTCCGCCCCAACGTCAGAAAAGGGgcggagtgagggagagagagggagggctccTTCCCACCCACACCACTCCACTTttcctcattctctttctccatTCAGTTGTGTCAAGTAGATGCCGGGAGCTCAGTGCTGTTTTTGAACAAGTTTTGCATGATTTTTCACTATTAGTCATTGTTTATGTTAGACTGTCACCCCTGTCAGGGGGGGTAGTAGTAACTGGTATAGTCAGAGTTTCAGGTAGGTTTGTGTGTTCGTGTTTTATCGTCCTCTGTTCCACAGTCATTGGTTGGTTCTCCGCAGAGCCAGCGGTCTACAAGGTAAGGCTACTCATACTCCAGGAACTGCTTGTGATAGAACAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1361136 True 1583 lncRNA 0.42 1 61000130 61001712

Neighbor

gene id symbol gene type direction distance location
LOC110486976 LOC106606471 coding downstream 434196 60460043 ~ 60565934 (-)
LOC110486979 LOC106606406 coding downstream 591410 60403617 ~ 60408720 (-)
LOC118936527 LOC106606405 coding downstream 613169 60377853 ~ 60386961 (-)
LOC110486987 cyp2k4 coding downstream 661703 60274725 ~ 60367022 (-)
LOC110486988 LOC106606456 coding downstream 737301 60260720 ~ 60262829 (-)
LOC110538808 LOC106601873 coding upstream 5114 61005929 ~ 61026251 (-)
LOC110486965 LOC100135781 coding upstream 544553 61546265 ~ 61550711 (-)
LOC110512085 LOC106601929 coding upstream 944940 61946652 ~ 62016705 (-)
LOC110487040 LOC106606439 coding upstream 1017993 62019705 ~ 62025559 (-)
LOC110487033 LOC106606440 coding upstream 1028964 62030676 ~ 62064793 (-)
G1193082 NA non-coding downstream 1398 60998419 ~ 60998732 (-)
G1193081 NA non-coding downstream 2562 60997355 ~ 60997568 (-)
G1193080 NA non-coding downstream 2914 60996931 ~ 60997216 (-)
G1193079 NA non-coding downstream 4395 60995159 ~ 60995735 (-)
G1193074 NA non-coding downstream 29038 60970782 ~ 60971092 (-)
G1193085 NA non-coding upstream 93 61001805 ~ 61002342 (-)
G1193219 NA non-coding upstream 143117 61144829 ~ 61145345 (-)
G1193222 NA non-coding upstream 148518 61150230 ~ 61150502 (-)
G1193231 NA non-coding upstream 158061 61159773 ~ 61160125 (-)
G1192815 NA other downstream 357945 60641675 ~ 60642185 (-)
G1192757 NA other downstream 424933 60572370 ~ 60575197 (-)
G1192535 NA other downstream 685576 60219166 ~ 60314554 (-)
G1193386 NA other upstream 274033 61275745 ~ 61277658 (-)
G1193568 NA other upstream 583062 61584774 ~ 61585260 (-)
G1194074 NA other upstream 1068397 62070109 ~ 62070835 (-)

Expression


Co-expression Network