Gene
RNA
| Item | Value |
|---|---|
| gene id | G1193222 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 61150230 ~ 61150502 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| low-density lipoprotein receptor-related protein 5-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1361288 | True | 273 | lncRNA | 0.57 | 1 | 61150230 | 61150502 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538808 | LOC106601873 | coding | downstream | 123979 | 61005929 ~ 61026251 (-) |
| LOC110486976 | LOC106606471 | coding | downstream | 584296 | 60460043 ~ 60565934 (-) |
| LOC110486979 | LOC106606406 | coding | downstream | 741510 | 60403617 ~ 60408720 (-) |
| LOC118936527 | LOC106606405 | coding | downstream | 763269 | 60377853 ~ 60386961 (-) |
| LOC110486987 | cyp2k4 | coding | downstream | 811803 | 60274725 ~ 60367022 (-) |
| LOC110486965 | LOC100135781 | coding | upstream | 395763 | 61546265 ~ 61550711 (-) |
| LOC110512085 | LOC106601929 | coding | upstream | 796150 | 61946652 ~ 62016705 (-) |
| LOC110487040 | LOC106606439 | coding | upstream | 869203 | 62019705 ~ 62025559 (-) |
| LOC110487033 | LOC106606440 | coding | upstream | 880174 | 62030676 ~ 62064793 (-) |
| LOC110487041 | LOC105013038 | coding | upstream | 916602 | 62067104 ~ 62098264 (-) |
| G1193219 | NA | non-coding | downstream | 4885 | 61144829 ~ 61145345 (-) |
| G1193085 | NA | non-coding | downstream | 147888 | 61001805 ~ 61002342 (-) |
| G1193084 | NA | non-coding | downstream | 148518 | 61000130 ~ 61001712 (-) |
| G1193082 | NA | non-coding | downstream | 151498 | 60998419 ~ 60998732 (-) |
| G1193231 | NA | non-coding | upstream | 9271 | 61159773 ~ 61160125 (-) |
| G1193358 | NA | non-coding | upstream | 54746 | 61205248 ~ 61268284 (-) |
| G1193412 | NA | non-coding | upstream | 188011 | 61338513 ~ 61339047 (-) |
| G1193414 | NA | non-coding | upstream | 188439 | 61338941 ~ 61420039 (-) |
| G1193413 | NA | non-coding | upstream | 268886 | 61419388 ~ 61426743 (-) |
| G1192815 | NA | other | downstream | 508045 | 60641675 ~ 60642185 (-) |
| G1192757 | NA | other | downstream | 575033 | 60572370 ~ 60575197 (-) |
| G1193386 | NA | other | upstream | 125243 | 61275745 ~ 61277658 (-) |
| G1193568 | NA | other | upstream | 434272 | 61584774 ~ 61585260 (-) |
| G1194074 | NA | other | upstream | 919607 | 62070109 ~ 62070835 (-) |
| LOC118938342 | LOC106606436 | other | upstream | 1013633 | 62164135 ~ 62174550 (-) |
