XLOC_033049 (tatdn2)


Basic Information

Item Value
gene id XLOC_033049
gene name tatdn2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40439858 ~ 40449399 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064229
ATCCTAGTGCAATGAACTGTGAAAAGGAGAGGGTGACTATATTGTGGCTGAATAAGGCCTTGAACTCGCCCAGAAAGCTGATGAGAAACAGTGCAGGAAGGGCACAGCCCACTTGCTGGGATGAAGAAGGGCATCATGATAATGATGATCATGGTGCTGCTGGTGGTGTGAGTGATGTTGGCTCTCCTGGCTTGAACACATCTACTGGGTCTGCTGGACTGGGCGACATGGAAAACATCTATCTCAGCACTCCACAGCACCCCAGTTCTTCAAAGAGTACACCCAAATTACGCTTAAAATTGACTGGACGCCATAGATCACTATTTAAAAAAAGCCCTGGTGATGACAGTGTTTCAGGACAGAAGTCTTCTGTTGTACCTTCACCTCCATCTGCTGGGAAGAAATGCAGAAGTCCAGAACAAGGACAAAAAGCCATTTACCTCAAAGCACTGAATGATGCAATGGGAAATGGAGGCAAAAAGTCAGTGTTTGGACATAAAAGTCTACCTGCTAAGAAATCCCCAGAGAAACCTGTGAATGCGGAGGAGGAGGAAAAGCACTCTGACCTCGAATGCTGCTCATTCAGTGAAAAGAATAATCCATCTCTTATTGCAGCTAAGGATGATGGTCCTCCTCCACTGGAGTTTATAGATACAGAAGATGATGAGACGGAAATAAAGCTAATGAAGGACACCAGGAGTGTGATCCTGAAACGTCCTGAGTCGCCTGATTGGTCCGATTTTGAGGATTCAGGACAGGTTGAAGTGTTCTCACAGGACGAGTCTTTCAAGCCAAAGAGGCAGCAAAAAAACCTTAAAGCAGACTGTGCAGTTGTGGACTTCACCAACACTCCTCCACTAGCGGAATACAATCCTTACACCACTTCAACGCCTGCAGCATTCTCTACAGAAGCTCAAGGCTCTGAGCAACACCCTCAGGAAACATCCTCGGACCTTTCATCCACCAAAAAATATTTACGCTCTAGGTCAATTAGGCGGTCCCTCAAATTACACCCTTCATCAGTAGATCTGATTCCTGAGCTCCAAACTAGCATTTGTGCACCCTCATCACCTGGTAGCTGGGGTTATTTTCCTTATTTGAACCGCAGAACTTCTGAATCAAATGCTTACACATCTTCACAGATGCTTCACATTGCAGACAGTGTTACCCGCAGGATTTCGGCTGGATCAGAGCCTCTTTGGCTGCCAGACTTAAGTTACATCAAAGCAGATTCTGCTGGATTTATTGACACACACTGTCACCTTGACATGCTCTATGGGAAGTTGGGTTTCAAAGGAAGTTTCCAAAGGTTTCAGAGCATGTATGCAAGTACTTTCCCAGTGGAGTTTAATGGCTGCATTGCAGACTTCTGCAACCCAAGAATCACACAGAGAGAAGCAATCTGGGAAGGATTGCTGGGAGAGGAGAAAGTGTGGGGGGCTTTTGGTTGCCACCCGCATTTTGCTAAGGAGTATAACCAAAATCATGAGCAAAGCATCATGTCTGCTATGCGCCACCCTAAAGCCATTGCGTTTGGAGAGATCGGTTTGGATTACTCACATAAGAACTCAACAGACTCCAGGAAACAGAAAGAGGTGTTTGAACGGCAGCTGCAGTTGGGTGTCGCTCTCAGGAAACCTCTAGTCATACATTGCCGTGATGCTGATGACGATGTGCTGACAATTATGAAGAAGTGTGTTCCCCGAGATTACAAAATACACAGACACTGCTTCACCAACAGCTATTCAGTGATTGAGCCCTTCCTAAAAGAATTCACTAACCTGTGTGTGGGTTTTACTGGACTGGTGACGTACCATCGCGCGACAGAGGCTCGAGACGCTGTGAGGAAAATCCCCCTCAACAGAATCCTGCTGGAGACAGATGCTCCATATTTCCTACCCAGACAGgtGCCCAAGTCTATATGCCGGTTTGCTCATCCTGGTATGGGAATCCACACACTGCGTGAGATCAGTCTGCTGAAGGGAGAGCTCCTGCCCACAGTACTACAAACTATCCGACAAAACACTTCACATATATATGGACTGTGACTGAAAACCCTAAGTTACTATAGTAAGTAGCAATATTAGTCTGCTGCAGTGAGCTAATTTTTGTTTGTATCCTCTTTGACCTTTTCCTTGTGTTTGCATAacaaaaaatatgaacatttacaaTTCAATGTACTATTTAAATTCTATGCTCATTTCCActtatgcttgttttttttgtagGGCATTTCACATCTGGTGAGaacaatttattttaagatttcttccaacagttttgttttaaaatggttCTCTGGTTTCTTTTGTTAAATGTCTGCATGCATGCTTACAAGCTGTGTTTGCTTGAGACATAAGTGACATAAAATGGCAGCTTGTGTCTTCCTTTGTGTTGGAAACAAAGTTGTTTTTCTCTGTATCATCACATGAAAGTTTgtgtaaaactaaaatgtaaagcATGTGAGAAATTGACAATTAGCTTTTACCAAGGTGTTGTTTTTATATGAATGGAACTTTTGTAATAATAAATGGTCTTGTATACGCAACATGAAGTctgttttttctttaaacatgTGAACTTAAACCAAATGCTACCGagtaaagaaaata
>TCONS_00064228
ATCCTAGTGCAATGAACTGTGAAAAGGAGAGGGTGACTATATTGTGGCTGAATAAGGCCTTGAACTCGCCCAGAAAGCTGATGAGAAACAGTGCAGGAAGGGCACAGCCCACTTGCTGGGATGAAGAAGGGCATCATGATAATGATGATCATGGTGCTGCTGGTGGTGTGAGTGATGTTGGCTCTCCTGGCTTGAACACATCTACTGGGTCTGCTGGACTGGGCGACATGGAAAACATCTATCTCAGCACTCCACAGCACCCCAGTTCTTCAAAGAGTACACCCAAATTACGCTTAAAATTGACTGGACGCCATAGATCACTATTTAAAAAAAGCCCTGGTGATGACAGTGTTTCAGGACAGAAGTCTTCTGTTGTACCTTCACCTCCATCTGCTGGGAAGAAATGCAGAAGTCCAGAACAAGGACAAAAAGCCATTTACCTCAAAGCACTGAATGATGCAATGGGAAATGGAGGCAAAAAGTCAGTGTTTGGACATAAAAGTCTACCTGCTAAGAAATCCCCAGAGAAACCTGTGAATGCGGAGGAGGAGGAAAAGCACTCTGACCTCGAATGCTGCTCATTCAGTGAAAAGAATAATCCATCTCTTATTGCAGCTAAGGATGATGGTCCTCCTCCACTGGAGTTTATAGATACAGAAGATGATGAGACGGAAATAAAGCTAATGAAGGACACCAGGAGTGTGATCCTGAAACGTCCTGAGTCGCCTGATTGGTCCGATTTTGAGGATTCAGGACAGGTTGAAGTGTTCTCACAGGACGAGTCTTTCAAGCCAAAGAGGCAGCAAAAAAACCTTAAAGCAGACTGTGCAGTTGTGGACTTCACCAACACTCCTCCACTAGCGGAATACAATCCTTACACCACTTCAACGCCTGCAGCATTCTCTACAGAAGCTCAAGGCTCTGAGCAACACCCTCAGGAAACATCCTCGGACCTTTCATCCACCAAAAAATATTTACGCTCTAGGTCAATTAGGCGGTCCCTCAAATTACACCCTTCATCAGTAGATCTGATTCCTGAGCTCCAAACTAGCATTTGTGCACCCTCATCACCTGGTAGCTGGGGTTATTTTCCTTATTTGAACCGCAGAACTTCTGAATCAAATGCTTACACATCTTCACAGATGCTTCACATTGCAGACAGTGTTACCCGCAGGATTTCGGCTGGATCAGAGCCTCTTTGGCTGCCAGACTTAAGTTACATCAAAGCAGATTCTGCTGGATTTATTGACACACACTGTCACCTTGACATGCTCTATGGGAAGTTGGGTTTCAAAGGAAGTTTCCAAAGGTTTCAGAGCATGTATGCAAGTACTTTCCCAGTGGAGTTTAATGGCTGCATTGCAGACTTCTGCAACCCAAGAATCACACAGAGAGAAGCAATCTGGGAAGGATTGCTGGGAGAGGAGAAAGTGTGGGGGGCTTTTGGTTGCCACCCGCATTTTGCTAAGGAGTATAACCAAAATCATGAGCAAAGCATCATGTCTGCTATGCGCCACCCTAAAGCCATTGCGTTTGGAGAGATCGGTTTGGATTACTCACATAAGAACTCAACAGACTCCAGGAAACAGAAAGAGGTGTTTGAACGGCAGCTGCAGTTGGGTGTCGCTCTCAGGAAACCTCTAGTCATACATTGCCGTGATGCTGATGACGATGTGCTGACAATTATGAAGAAGTGTGTTCCCCGAGATTACAAAATACACAGACACTGCTTCACCAACAGCTATTCAGTGATTGAGCCCTTCCTAAAAGAATTCACTAACCTGTGTGTGGGTTTTACTGGACTGGTGACGTACCATCGCGCGACAGAGGCTCGAGACGCTGTGAGGAAAATCCCCCTCAACAGAATCCTGCTGGAGACAGATGCTCCATATTTCCTACCCAGACAGgtGCCCAAGTCTATATGCCGGTTTGCTCATCCTGGTATGGGAATCCACACACTGCGTGAGATCAGTCTGCTGAAGGGAGAGCTCCTGCCCACAGTACTACAAACTATCCGACAAAACACTTCACATATATATGGACTGTGACTGAAAACCCTAAGTTACTATAGGCATTTCACATCTGGTGAGaacaatttattttaagatttcttccaacagttttgttttaaaatggttCTCTGGTTTCTTTTGTTAAATGTCTGCATGCATGCTTACAAGCTGTGTTTGCTTGAGACATAAGTGACATAAAATGGCAGCTTGTGTCTTCCTTTGTGTTGGAAACAAAGTTGTTTTTCTCTGTATCATCACATGAAAGTTTgtgtaaaactaaaatgtaaagcATGTGAGAAATTGACAATTAGCTTTTACCAAGGTGTTGTTTTTATATGAATGGAACTTTTGTAATAATAAATGGTCTTGTATACGCAACATGAAGTctgttttttctttaaacatgTGAACTTAAACCAAATGCTACCGagtaaagaaaata
>TCONS_00064230
CCTCGAATGCTGCTCATTCAGTGAAAAGAATAATCCATCTCTTATTGCAGCTAAGGATGATGGTCCTCCTCCACTGGAGTTTATAGATACAGAAGATGATGAGACGGAAATAAAGCTAATGAAGGACACCAGGAGTGTGATCCTGAAACGTCCTGAGTCGCCTGATTGGTCCGATTTTGAGGATTCAGGACAGGTTGAAGTGTTCTCACAGGACGAGTCTTTCAAGCCAAAGAGGCAGCAAAAAAACCTTAAAGCAGACTGTGCAGTTGTGGACTTCACCAACACTCCTCCACTAGCGGAATACAATCCTTACACCACTTCAACGCCTGCAGCATTCTCTACAGAAGCTCAAGGCTCTGAGCAACACCCTCAGGAAACATCCTCGGACCTTTCATCCACCAAAAAATATTTACGCTCTAGGTCAATTAGGCGGTCCCTCAAATTACACCCTTCATCAGTAGATCTGATTCCTGAGCTCCAAACTAGCATTTGTGCACCCTCATCACCTGGTAGCTGGGGTTATTTTCCTTATTTGAACCGCAGAACTTCTGAATCAAATGCTTACACATCTTCACAGATGCTTCACATTGCAGACAGTGTTACCCGCAGGATTTCGGCTGGATCAGAGCCTCTTTGGCTGCCAGACTTAAGTTACATCAAAGCAGATTCTGCTGGATTTATTGACACACACTGTCACCTTGACATGCTCTATGGGAAGTTGGGTTTCAAAGGAAGTTTCCAAAGGTTTCAGAGCATGTATGCAAGTACTTTCCCAGTGGAGTTTAATGGCTGCATTGCAGACTTCTGCAACCCAAGAATCACACAGAGAGAAGCAATCTGGGAAGGATTGCTGGGAGAGGAGAAAGTGTGGGGGGCTTTTGGTTGCCACCCGCATTTTGCTAAGGAGTATAACCAAAATCATGAGCAAAGCATCATGTCTGCTATGCGCCACCCTAAAGCCATTGCGTTTGGAGAGATCGGTTTGGATTACTCACATAAGAACTCAACAGACTCCAGGAAACAGAAAGAGGTGTTTGAACGGCAGCTGCAGTTGGGTGTCGCTCTCAGGAAACCTCTAGTCATACATTGCCGTGATGCTGATGACGATGTGCTGACAATTATGAAGAAGTGTGTTCCCCGAGATTACAAAATACACAGACACTGCTTCACCAACAGCTATTCAGTGATTGAGCCCTTCCTAAAAGAATTCACTAACCTGTGTGTGGGTTTTACTGGACTGGTGACGTACCATCGCGCGACAGAGGCTCGAGACGCTGTGAGGAAAATCCCCCTCAACAGAATCCTGCTGGAGACAGATGCTCCATATTTCCTACCCAGACAGgtGCCCAAGTCTATATGCCGGTTTGCTCATCCTGGTATGGGAATCCACACACTGCGTGAGATCAGTCTGCTGAAGGGAGAGCTCCTGCCCACAGTACTACAAACTATCCGACAAAACACTTCACATATATATGGACTGTGACTGAAAACCCTAAGTTACTATAGGCATTTCACATCTGGTGAGaacaatttattttaagatttcttccaacagttttgttttaaaatggttCTCTGGTTTCTTTTGTTAAATGTCTGCATGCATGCTTACAAGCTGTGTTTGCTTGAGACATAAGTGACATAAAATGGCAGCTTGTGTCTTCCTTTGTGTTGGAAACAAAGTTGTTTTTCTCTGTATCATCACATGAAAGTTTgtgtaaaactaaaatgtaaagcATGTGAGAAATTGACAATTAGCTTTTACCAAGGTGTTGTTTTTATATGAATGGAACTTTTGTAATAATAAATGGTCTTGTATACGCAA
>TCONS_00064231
AATTTGGACTGAATCGGGTTTAATCAAGCCTTACACACTTTCCGACTGTTTTCCGTTCTTGTGATCGCCGTTATGGACTCTCACGCCAGGGCTCACAGTTTTAGATCCTAGTGCAATGAACTGTGAAAAGGAGAGGGTGACTATATTGTGGCTGAATAAGGCCTTGAACTCGCCCAGAAAGCTGATGAGAAACAGTGCAGGAAGGGCACAGCCCACTTGCTGGGATGAAGAAGGGCATCATGATAATGATGATCATGGTGCTGCTGGTGGTGTGAGTGATGTTGGCTCTCCTGGCTTGAACACATCTACTGGGTCTGCTGGACTGGGCGACATGGAAAACATCTATCTCAGCACTCCACAGCACCCCAGTTCTTCAAAGAGTACACCCAAATTACGCTTAAAATTGACTGGACGCCATAGATCACTATTTAAAAAAAGCCCTGGTGATGACAGTGTTTCAGGACAGAAGTCTTCTGTTGTACCTTCACCTCCATCTGCTGGGAAGAAATGCAGAAGTCCAGAACAAGGACAAAAAGCCATTTACCTCAAAGCACTGAATGATGCAATGGGAAATGGAGGCAAAAAGTCAGTGTTTGGACATAAAAGTCTACCTGCTAAGAAATCCCCAGAGAAACCTGTGAATGCGGAGGAGGAGGAAAAGCACTCTGACCTCGAATGCTGCTCATTCAGTGAAAAGAATAATCCATCTCTTATTGCAGCTAAGGATGATGGTCCTCCTCCACTGGAGTTTATAGATACAGAAGATGATGAGACGGAAATAAAGCTAATGAAGGACACCAGGAGTGTGATCCTGAAACGTCCTGAGTCGCCTGATTGGTCCGATTTTGAGGATTCAGGACAGGTTGAAGTGTTCTCACAGGACGAGTCTTTCAAGCCAAAGAGGCAGCAAAAAAACCTTAAAGCAGACTGTGCAGTTGTGGACTTCACCAACACTCCTCCACTAGCGGAATACAATCCTTACACCACTTCAACGCCTGCAGCATTCTCTACAGAAGCTCAAGGCTCTGAGCAACACCCTCAGGAAACATCCTCGGACCTTTCATCCACCAAAAAATATTTACGCTCTAGGTCAATTAGGCGGTCCCTCAAATTACACCCTTCATCAGTAGATCTGATTCCTGAGCTCCAAACTAGCATTTGTGCACCCTCATCACCTGGTAGCTGGGGTTATTTTCCTTATTTGAACCGCAGAACTTCTGAATCAAATGCTTACACATCTTCACAGATGCTTCACATTGCAGACAGTGTTACCCGCAGGATTTCGGCTGGATCAGAGCCTCTTTGGCTGCCAGACTTAAGTTACATCAAAGCAGATTCTGCTGGATTTATTGACACACACTGTCACCTTGACATGCTCTATGGGAAGTTGGGTTTCAAAGGAAGTTTCCAAAGGTTTCAGAGCATGTATGCAAGTACTTTCCCAGTGGAGTTTAATGGCTGCATTGCAGACTTCTGCAACCCAAGAATCACACAGAGAGAAGCAATCTGGGAAGGATTGCTGGGAGAGGAGAAAGTGTGGGGGGCTTTTGGTTGCCACCCGCATTTTGCTAAGGAGTATAACCAAAATCATGAGCAAAGCATCATGTCTGCTATGCGCCACCCTAAAGCCATTGCGTTTGGAGAGATCGGTTTGGATTACTCACATAAGAACTCAACAGACTCCAGGAAACAGAAAGAGGTGTTTGAACGGCAGCTGCAGTTGGGTGTCGCTCTCAGGAAACCTCTAGTCATACATTGCCGTGATGCTGATGACGATGTGCTGACAATTATGAAGAAGTGTGTTCCCCGAGATTACAAAATACACAGACACTGCTTCACCAACAGCTATTCAGTGATTGAGCCCTTCCTAAAAGAATTCACTAACCTGTGTGTGGGTTTTACTGGACTGGTGACGTACCATCGCGCGACAGAGGCTCGAGACGCTGTGAGGAAAATCCCCCTCAACAGAATCCTGCTGGAGACAGATGCTCCATATTTCCTACCCAGACAGgtGCCCAAGTCTATATGCCGGTTTGCTCATCCTGGTATGGGAATCCACACACTGCGTGAGATCAGTCTGCTGAAGGGAGAGCTCCTGCCCACAGTACTACAAACTATCCGACAAAACACTTCACATATATATGGACTGTGACTGAAAACCCTAAGTTACTATAGTAAGTAGCAATATTAGTCTGCTGCAGTGAGCTAATTTTTGTTTGTATCCTCTTTGACCTTTTCCTTGTGTTTGCATAacaaaaaatatgaacatttacaaTTCAATGTACTATTTAAATTCTATGCTCATTTCCActtatgcttgttttttttgtagGGCATTTCACATCTGGTGAGaacaatttattttaagatttcttccaacagttttgttttaaaatggttCTCTGGTTTCTTTTGTTAAATGTCTGCATGCATGCTTACAAGCTGTGTTTGCTTGAGACATAAGTGACATAAAATGGCAGCTTGTGTCTTCCTTTGTGTTGGAAACAAAGTTGTTTTTCTCTGTATCATCACATGAAAGTTTgtgtaaaactaaaatgtaaagcATGTGAGAAATTGACAATTAGCTTTTACCAAGGTGTTGTTTTTATATGAATGGAACTTTTGTAATAATAAATGGTCTTGTATACGCAA

Function

symbol description
tatdn2 Predicted to enable endodeoxyribonuclease activity, producing 5'-phosphomonoesters. Orthologous to human TATDN2 (TatD DNase domain containing 2).

GO:

id name namespace
GO:0016788 hydrolase activity, acting on ester bonds molecular_function
GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081022-51 Predicted to enable endodeoxyribonuclease activity, producing 5'-phosphomonoesters. Orthologous to human TATDN2 (TatD DNase domain containing 2).

Ensembl:

ensembl_id ENSDARG00000070618

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064229 False 2612 mRNA 0.43 6 40439858 40448416
TCONS_00064228 False 2454 mRNA 0.44 7 40439858 40448416
TCONS_00064230 False 1825 mRNA 0.44 6 40439922 40446536
TCONS_00064231 True 2652 mRNA 0.44 7 40439922 40449399

Neighbor

gene id symbol gene type direction distance location
XLOC_033048 ccdc174 coding downstream 4833 40429773 ~ 40435025 (-)
XLOC_033047 si:dkey-28n18.9 coding downstream 10444 40422224 ~ 40429414 (-)
XLOC_033046 NA coding downstream 30733 40383424 ~ 40409125 (-)
XLOC_033045 ttll3 coding downstream 87643 40329308 ~ 40352215 (-)
XLOC_033044 col7a1 coding downstream 127767 40184235 ~ 40312091 (-)
XLOC_033050 vhl coding upstream 1871 40451270 ~ 40455109 (-)
XLOC_033051 crbn coding upstream 7399 40456798 ~ 40466861 (-)
XLOC_033052 NA coding upstream 28031 40477430 ~ 40482198 (-)
XLOC_033053 tomm6 coding upstream 123146 40572545 ~ 40573270 (-)
XLOC_033054 tspo coding upstream 128820 40578219 ~ 40583253 (-)
XLOC_033043 NA non-coding downstream 257338 40173228 ~ 40182520 (-)
XLOC_033038 NA non-coding downstream 395747 40038692 ~ 40044111 (-)
XLOC_033025 CU467856.1 non-coding downstream 914353 39524924 ~ 39525505 (-)
XLOC_033024 NA non-coding downstream 918026 39491846 ~ 39521832 (-)
XLOC_033055 CU855953.1 non-coding upstream 175905 40625304 ~ 40625420 (-)
XLOC_033056 NA non-coding upstream 176232 40625631 ~ 40629161 (-)
XLOC_033058 dre-mir-429b non-coding upstream 203730 40653129 ~ 40653238 (-)
XLOC_033059 dre-mir-141 non-coding upstream 206604 40656003 ~ 40656085 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000340_09632037_09635287 TATDN2 coding CI01000340 null 9631475 ~ 9635580 (-)