XLOC_035450 (pim2)


Basic Information

Item Value
gene id XLOC_035450
gene name pim2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 8927870 ~ 8934069 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069571
AGAACTGCGCGAGTGTCTGAGGCGGAGGACGCGTGATAACGGTGGAGTTTGAATCGAAAACAAATAGTGGATTAAAAGCAACAGACGGACATGGATATGCTCTGCTGAGGCGcctatttttcatattatttggctgtttgttttgattattagagtttttattcttattaaaacCTGAAAATGTTGGACAAACGGATTGTTGACGTGCGTTTGGATCAGCTGGAAATCCTGAAAGCCAAAAATggcaAAGAGCATTTTGAGAAGCAGTATACTATGGGAAATCTTCTGGGAAGCGGTGGTTTCGGTTCAGTTTACTCCGGGCATCGGATTTCAGACGGACAAAAggttgCTATCAAACAAATATCCCGAGACAGAATCCAACAGTGGTCAAAAATGCCTGGTGAAGTAAACCCGGTTCCCAATGAGATTGCTCTCCTGCAGAGTCTCGGTGGAGGATCGGGGTCTGTACCCGGCCATCGAGGCATCATCCGGATGCTGGACTGGTTTGAAATACCCGGTCAGGAATACCTCATTGTGTTTGAAAAGCCTCAACACTGCCAGGACCTGTTTGACTTCATCACTGAACGCGGAGCTCTTGATGAGTCTCTTGCACGGAGGTTCCTCAAGCAAGTCATTGAAGCTGTGCAGTTCTGCCACTCTAAGGGAATCGTTCACAGAGACATCAAGGATGAAAACATCCTCGTTGACACTCGCACTGGAGACATTAAAGTCATCGATTTTGGATCAGGAGCAACGCTAAAGGACTCCATGTACACTGACTTTGAAGGTACCAGAGTCTACAGTCCACCTGAGTGGATCCTTTACCACAAATACCACGCTCTTCCGCTCACTGTGTGGTCATTGGGTGTCCTCCTGTACGATATGGTGTGTGGAGACATTCCCTTTGAGCAGGACACTGACATTGTAAAGGCCAAACCAAGCTTCAATAAACGCATCTCCAATGATTGCCGGTCTCTGATTTGCTCGTGCCTTTCATTCAATCCGGGGGATCGGCCCAGTTTGGAGCAGATTTTGCAGCACCCCTGGATGATGGAGAGCTCTGTGGACAATGGAGATTTGCAAGAGGAAAGCAAAATCAAGCCAAGCCTTTGAATCCCAAAAAGACTTTGGACTCACTGTTTCGATTTACACTGGACTTTCCGAACTCGAGTTGCTGGCTTCCGGATTCTTCCTTATTTATTTTCTCCGTAGTTCTTCTGTCTTTGACATCCGTTTAGTGGGGATCTGTGCTTCCACAACCCACGAAAATAGCCCTGGATTGCTGCAGGTTTTActttatgaatgaatatttccaTCGCAGCTCAGCGAGGGGAACGTTTTTCttatttattgctatttattttataatccAGAAACATACTAAGTTATTTTTTGCACTCTTTGGATCACCAAGTTTCCGAGGCAGTAAACTGTGTTCGATTTATTAGTTCATTTCAACtcatttaaagggatggttcaccccaaaaacatcatttactcactgtttgACCTTTCAGTAGAAccaaaaagaagatactttgaagaatgctggaaaccggtaaccattgacttccatagtgtttgtttttcctactgtggatgaAACCCCTAAAGCAGCTTGGTagatagtgagtaaatgttgtgAATGATCCCCTTTAAATGACAGTGGGTGGACTTGCGGTCTCTTCTCAGACTGCGGTGATACCTGGTTTTACAGGTGTGTTCTGTACAGTGATATTCTCCCCCCGTTCTAAGGGGTTTCAGAAAGACTTTGGATCTCCTTTCCAAGTGATGGTAATAATTGAAGATCTGCTCCCATTGATCAACACGCACTCGAAACTAAGAGAAGAGGAGCATCCTTGTTTACTCTAAATTAACAATCCTGATTCCTCAGAGATGTTAGCCAAAGAGGGTTTTGGTTTCTGTTGTTGTTGCTTGTGAAATACCTGACCTGTGACTTTAAGTGTTGTCTCTTTGTCATGCACACGCTCTGAAGTGTGGAAGTTCCCAAAGGTCAGAGTGTCATATTAGGGGCTTCACCTACTAACCCACTGTTGATGTTTACTAAAAAGTGAGCAGTTCCGATCAGTTGATTATAACACACCAAAGAGCTCTGCCTTAGGTTTATATGCATAATACACACAATTTGGacctaaatttatttatttgtttgttagtgtGGCTTGCGTTTTGTGATCCAAAGCAAGACTGAAAGATTAAAATGATCGTGAATTGGATCTCTCTCAATGTAACGTGTCGTGAGTTTGTGTAAACACTGGGgaaattttgtgtttttatttttgataacgTCAGAAATCTTTGATTTTGTTATTCAAATCCTTGCATTTTTGGCTTGGGTTTGCACAAAAGCTTTCCTGTAAATACTTGTGTATTGAATAATGTGATGTGGCCGCTGTCACGTGATGTTTAATTTAAGAGATTCTACAAATAAAAAGTTATAGATGTAACGtctatatttaaataca
>TCONS_00069572
GGCGGAGGACGCGTGATAACGGTGGAGTTTGAATCGAAAACAAATAGTGGATTAAAAGCAACAGACGGACATGGATATGCTCTGCTGAGGCGcctatttttcatattatttggctgtttgttttgattattagagtttttattcttattaaaacCTGAAAATGTTGGACAAACGGATTGTTGACGTGCGTTTGGATCAGCTGGAAATCCTGAAAGCCAAAAATggcaAAGAGCATTTTGAGAAGCAGTATACTATGGGAAATCTTCTGGGAAGCGGTGGTTTCGGTTCAGTTTACTCCGGGCATCGGATTTCAGACGGACAAAAggttgCTATCAAACAAATATCCCGAGACAGAATCCAACAGTGGTCAAAAATGCCTGGTGAAGTAAACCCGGTTCCCAATGAGATTGCTCTCCTGCAGAGTCTCGGTGGAGGATCGGGGTCTGTACCCGGCCATCGAGGCATCATCCGGATGCTGGACTGGTTTGAAATACCCGGTCAGGAATACCTCATTGTGTTTGAAAAGCCTCAACACTGCCAGGACCTGTTTGACTTCATCACTGAACGCGGAGCTCTTGATGAGTCTCTTGCACGGAGGTGAAAATTCATGACAGATTTCTCACATTTTTTTAATGGTAACAGTGAG

Function

symbol description
pim2 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to be involved in protein autophosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Is expressed in several structures, including hatching gland; notochord; periderm; polster; and yolk syncytial layer. Orthologous to human PIM2 (Pim-2 proto-oncogene, serine/threonine kinase).

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0006915 apoptotic process biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016310 phosphorylation biological_process
GO:0046777 protein autophosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0016740 transferase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0004672 protein kinase activity molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
ko05200 Pathways in cancer
ko05221 Acute myeloid leukemia
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-000831-6 Predicted to enable ATP binding activity and protein serine/threonine kinase activity. Predicted to be involved in protein autophosphorylation. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm. Is expressed in several structures, including hatching gland; notochord; periderm; polster; and yolk syncytial layer. Orthologous to human PIM2 (Pim-2 proto-oncogene, serine/threonine kinase).

Ensembl:

ensembl_id ENSDARG00000059001

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069571 False 2486 mRNA 0.42 7 8927870 8934069
TCONS_00069572 True 646 lncRNA 0.45 4 8927890 8929793

Neighbor

gene id symbol gene type direction distance location
XLOC_035449 otud5a coding upstream 5239 8860902 ~ 8922631 (+)
XLOC_035448 si:ch211-180f4.1 coding upstream 79704 8845932 ~ 8848166 (+)
XLOC_035447 elk1 coding upstream 182972 8712446 ~ 8744898 (+)
XLOC_035446 uxt coding upstream 223440 8699085 ~ 8704430 (+)
XLOC_035445 usp11 coding upstream 244937 8643901 ~ 8682933 (+)
XLOC_035451 si:dkey-83k24.5 coding downstream 2843 8936912 ~ 8942456 (+)
XLOC_035452 slc35a2 coding downstream 13554 8947623 ~ 8957679 (+)
XLOC_035453 bcap31 coding downstream 39356 8973425 ~ 9029175 (+)
XLOC_035454 BX284664.1 coding downstream 177003 9111072 ~ 9111190 (+)
XLOC_035455 pnck coding downstream 215367 9149436 ~ 9167115 (+)
XLOC_035442 CU928118.1 non-coding upstream 606274 8321482 ~ 8321596 (+)
XLOC_035435 NA non-coding upstream 1078076 7824772 ~ 7849794 (+)
XLOC_035432 CR385024.1 non-coding upstream 1275900 7644265 ~ 7651970 (+)
XLOC_035431 NA non-coding upstream 1331776 7587459 ~ 7596094 (+)
XLOC_035425 CU862015.1 non-coding upstream 1833987 7086916 ~ 7093883 (+)
XLOC_035458 NA non-coding downstream 860799 9794868 ~ 9796429 (+)
XLOC_035459 NA non-coding downstream 920669 9854738 ~ 9860610 (+)
XLOC_035461 CT573497.1 non-coding downstream 959603 9893672 ~ 9893788 (+)
XLOC_035463 CU928205.1 non-coding downstream 1134203 10068272 ~ 10074129 (+)

Expression


Co-expression Network