XLOC_035520 (paox1)


Basic Information

Item Value
gene id XLOC_035520
gene name paox1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 15239549 ~ 15250265 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069672
CAGGAAGTGGAACTAAGCTATGTAACTAACCGCTAAAGGTGGATAGTCAACATTCTGCTCCGTTACAATCCTTTAGTCATCATGGTAGACAGGAGTCCATCTATCGTGGTTGTCGGTGCAGGTGTGGCAGGACTCGCCGCTGCCAAGAAGCTGAAAGAATATGGATTTAATGACGTCACTGTGCTGGAAGCCGCCGAAAATGTTGGAGGAAGAGTAGCTACTGCAACTCTGGGTAATGCATGTGTTGACACCGGAGCACAGTACATCCATGGGACGTCAGAAAAAAACCCAGTCTACTGTCTACTAAAAGGCCTTCTAAACCAGCTCCCTGAGATGGGCGAAGAagcattttacaataataaaggGCACAAAGTGAATGCAAACTTCGCCAGACGTGCGTATGAACATGGGGAGAGCTTCATTTATCACCGTGGCTCGGGAAACTCAGGAAAGAGTTTAGGTGAACACTACGCAGTGAAAACCCAGGGTGTGATTGAACGTTTGCAAGAAGATGAGAAAGCAAGAATGCAGAGTGTTTTTGCTTTGGTCGGAAAAGACATGCTGATTGACATTGGTGCTTCAGACCTTCACAGAATCTCTCTAGACTCGTGGCAGTATTATATCGATATGGGGGACAGCGTCAATATTACAGGGTTCATGTATCAGCTTGTGGATCTACTAAAAGAAGACTTCCCTAAGGATCGTCTGCTGCTGAAAAGAGAAGTCCGTACGATCAAATGGGATGGATCCTTCCCTTCTCCGCAAAATGAAGCTTCTCCTGAAGGAAAAGTCCGCCAATACCCTGTTTGCATTGTCTGTGAGGATGGGGAGGAGATTCTAGCTGATCATGTAATAGTTACCGTTTCACTGGGTTGCCTAAAAGCACAAGCATCCGACCTCTTCATCCCCAGTCTTCCAACTGAGAAAATTGAGGTCATCAATAAGCTGTGCTTTGGCAATATTGCCAAGATCTTTCTGGCGTATGAAGAGGCATTCTGGGAGAATGATGTTGGTTCTATCAGCTTCATTTATGAGGATGACACTCCTGCCTCCATTTCCACCAACAAAATGCAGTGGCTCAAAAGCATGCAGAGCTTTTCTGTCCTGAGGCCCAAAGAAAGGTTTGGAAATGTATTAAttggctggtgtcctggagaaaTAGCAGACCTGGTTGAAACCATGACAGATAATGAACTCTCAGCTGCTGTCACTGACCACCTCAAAATGTTCTTTGGACCCAGTGCAAATATTCCACAGCCCAAATCTATACTGTGCACTAAGTGGCGCAGCAACAAATTTATAAAGGGAAGTTACACTTTTCTTCCTGTTGGTGTTGATGGGCAAGTTATGGACACACTAGCACAACCACTAGAGGGCAGCCAGTTTCCTGATGCACATCTGCAGGTCATGTTTGCAGGTGAGGCCACGATGAAGACTCTTTATGGCACAGTGCAAGGAGCTCTACTTTCAGGACACAGGGAGGCAGACAGACTGGCAGCACATTATAAGGATGCAGTGGCTTCCACTTCAGCTTCAATGGACAAACACGTTTAAAGagttacatttatattatttgtctAAAATTCAGACTAGTGTACTAGTACTGAACAAACCTACCCCCTGATGTTGCTCCAGAGTGTTTTAATAAGAAAAGAACGGGGGTATTAGATGTACCATATATTTATCTTTGCCCACATTTACAGCAAACAATGCAGAAtctttttcaaattaaaatatatgaattaagATCAATGTAATGAGAGGATGACATGTGGATAAACTGGTTATCTCTTATCTTGGTATCTTAGTCATGAATGGATGGAAAGTGATTTTAGGACTCTGCTTCCCAATTTTGACTAACCTATAATGAGATTTTTTATATACTTTCTGTGAAGTTGTACATTTTCAGGTGTTAAAGGGAaaactaaaaaagtaataatattaggAATGGATGGAGCATTGGGGGCGTTGACACggtggtgtagtgggtagcacgatcgcctcgcagcaagaaggtcgctggttcaagcttagactgggtcagttggtatttctgtgtggagtttgcatgttctccccgtgttggtgtgggtttcctccgagttcgTTCGG
>TCONS_00069673
GTATGACGATCATGTGCATTTATTGATCGTTAAATGTTTCAtttagggttaattattgtaTGTCCATCAGGTTCATGTATCAGCTTGTGGATCTACTAAAAGAAGACTTCCCTAAGGATCGTCTGCTGCTGAAAAGAGAAGTCCGTACGATCAAATGGGATGGATCCTTCCCTTCTCCGCAAAATGAAGCTTCTCCTGAAGGAAAAGTCCGCCAATACCCTGTTTGCATTGTCTGTGAGGATGGGGAGGAGATTCTAGCTGATCATGTAATAGTTACCGTTTCACTGGGTTGCCTAAAAGCACAAGCATCCGACCTCTTCATCCCCAGTCTTCCAACTGAGAAAATTGAGGTCATCAATAAGCTGTGCTTTGGCAATATTGCCAAGATCTTTCTGGCGTATGAAGAGGCATTCTGGGAGAATGATGTTGGTTCTATCAGCTTCATTTATGAGGATGACACTCCTGCCTCCATTTCCACCAACAAAATGCAGTGGCTCAAAAGCATGCAGAGCTTTTCTGTCCTGAGGCCCAAAGAAAGGTTTGGAAATGTATTAAttggctggtgtcctggagaaaTAGCAGACCTGGTTGAAACCATGACAGATAATGAACTCTCAGCTGCTGTCACTGACCACCTCAAAATGTTCTTTGGACCCAGTGCAAATATTCCACAGCCCAAATCTATACTGTGCACTAAGTGGCGCAGCAACAAATTTATAAAGGGAAGTTACACTTTTCTTCCTGTTGGTGTTGATGGGCAAGTTATGGACACACTAGCACAACCACTAGAGGGCAGCCAGTTTCCTGATGCACATCTGCAGGTCATGTTTGCAGGTGAGGCCACGATGAAGACTCTTTATGGCACAGTGCAAGGAGCTCTACTTTCAG

Function

symbol description
paox1 Predicted to enable polyamine oxidase activity. Orthologous to human SMOX (spermine oxidase).

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function
GO:0046592 polyamine oxidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081104-436 Predicted to enable polyamine oxidase activity. Orthologous to human SMOX (spermine oxidase).

Ensembl:

ensembl_id ENSDARG00000043403

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069672 False 2112 mRNA 0.44 8 15239549 15250265
TCONS_00069673 True 888 lncRNA 0.44 5 15245108 15249624

Neighbor

gene id symbol gene type direction distance location
XLOC_035519 fnbp1l coding upstream 158976 14986833 ~ 15080573 (+)
XLOC_035518 abl2 coding upstream 254273 14915332 ~ 14985276 (+)
XLOC_035517 soat1 coding upstream 329326 14886452 ~ 14910223 (+)
XLOC_035516 si:dkey-21p1.3 coding upstream 355857 14855471 ~ 14883692 (+)
XLOC_035514 cacna1ea coding upstream 411099 14710542 ~ 14828450 (+)
XLOC_035521 zgc:171480 coding downstream 1183 15251448 ~ 15253800 (+)
XLOC_035522 slc5a9 coding downstream 4299 15254564 ~ 15268932 (+)
XLOC_035523 gclm coding downstream 19158 15269423 ~ 15277252 (+)
XLOC_035524 dnttip2 coding downstream 27609 15277874 ~ 15286309 (+)
XLOC_035525 BX510319.1 coding downstream 226360 15476625 ~ 15479807 (+)
XLOC_035515 CR450798.1 non-coding upstream 433259 14806174 ~ 14806290 (+)
XLOC_035513 NA non-coding upstream 586899 14612986 ~ 14652650 (+)
XLOC_035512 NA non-coding upstream 678119 14558645 ~ 14561430 (+)
XLOC_035511 BX294388.1 non-coding upstream 823726 14415698 ~ 14415823 (+)
XLOC_035509 NA non-coding upstream 993196 14241585 ~ 14246353 (+)
XLOC_035527 NA non-coding downstream 1009321 16259586 ~ 16265811 (+)
XLOC_035529 NA non-coding downstream 1313688 16563953 ~ 16582042 (+)
XLOC_035530 NA non-coding downstream 1320071 16570336 ~ 16577809 (+)
XLOC_035531 NA non-coding downstream 1359413 16609678 ~ 16613471 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000010_05451275_05454147 NA coding CI01000010 null 5450966 ~ 5454779 (-)