G1647311


Basic Information

Item Value
gene id G1647311
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 62868238 ~ 62868893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1884861
ctatctacagcacCTCCTATTGGAGAGTTGATctctctacagcacctcctactgcaGAGTTGATctctctacagcacctcctactggagagttgatttctctacagcacctcctactggagagttgatctctctacagcacctcctactggagagttgatttctctacagcacctcctactgaagAGTTGAtccatctacagcacctcctactggagagttgatctctCTACAACATCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1884861 True 240 lncRNA 0.48 3 62868238 62868893

Neighbor

gene id symbol gene type direction distance location
LOC110512290 LOC106600942 coding upstream 96282 62655733 ~ 62771956 (+)
LOC110504278 LOC102780996 coding upstream 230112 62604904 ~ 62638126 (+)
LOC110504279 LOC106599953 coding upstream 265464 62500076 ~ 62602774 (+)
srsf5a LOC106611464 coding upstream 374600 62486921 ~ 62493719 (+)
LOC110504280 LOC106602928 coding upstream 382791 62466254 ~ 62485447 (+)
LOC100136022 NA coding downstream 16690 62885583 ~ 63042917 (+)
map3k9 map3k9 coding downstream 181924 63050817 ~ 63103044 (+)
med6 med6 coding downstream 272530 63141423 ~ 63152629 (+)
pcnx1 pcnx1 coding downstream 284460 63153353 ~ 63232158 (+)
LOC110498282 NA coding downstream 379729 63248622 ~ 63287372 (+)
G1647295 NA non-coding upstream 57974 62809721 ~ 62810264 (+)
G1647278 NA non-coding upstream 101891 62765901 ~ 62766347 (+)
G1647275 NA non-coding upstream 119606 62746494 ~ 62748632 (+)
G1647274 NA non-coding upstream 128125 62739660 ~ 62740113 (+)
G1647273 NA non-coding upstream 138155 62729476 ~ 62730083 (+)
G1647320 NA non-coding downstream 16038 62884931 ~ 62885334 (+)
G1647322 NA non-coding downstream 20386 62889279 ~ 62889482 (+)
G1647323 NA non-coding downstream 21164 62890057 ~ 62892581 (+)
G1647325 NA non-coding downstream 28170 62897063 ~ 62897282 (+)
G1647330 NA non-coding downstream 38119 62907012 ~ 62908317 (+)
G1646509 NA other upstream 722948 62144183 ~ 62145290 (+)
G1646294 NA other upstream 1307154 61558041 ~ 61561084 (+)
G1646225 NA other upstream 1523084 61344787 ~ 61345154 (+)
LOC110498404 LOC105025554 other upstream 1576397 61242422 ~ 61308910 (+)
G1647342 NA other downstream 148062 63016955 ~ 63018688 (+)
G1647411 NA other downstream 206256 63075149 ~ 63077143 (+)
G1647477 NA other downstream 333863 63202756 ~ 63204057 (+)
LOC110498409 LOC106592792 other downstream 522732 63380908 ~ 63414582 (+)
G1648296 NA other downstream 1259315 64128208 ~ 64129068 (+)

Expression


Co-expression Network