G1647539


Basic Information

Item Value
gene id G1647539
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63434368 ~ 63434704 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885148
attattgattgtatgtttgtttactccatgtgtaactctgtgttgttgtttgtgtcgaactgctttgctttatcttggccaggtcacagttgcaattgagaacttgttctcaactggcctacctggttaaataaaggtgttctctactagcctacctggttaaataaaggtgttctcaactggcctacctggttaaataaaggtgttctcaacaggcctacctggttaaataaaggtaaaataaataaaaaatatcagacGTCAGGATTAGTCCCAGATGCAGTTCGATTAATAGGTGTGTATTAACAAAACAGGGGAAAtgcagatgacaggtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885148 True 337 lncRNA 0.39 1 63434368 63434704

Neighbor

gene id symbol gene type direction distance location
LOC110498409 LOC106592792 coding upstream 19786 63380908 ~ 63414582 (+)
rtf1 rtf1 coding upstream 62033 63348949 ~ 63372335 (+)
LOC110498286 NA coding upstream 88076 63339785 ~ 63346292 (+)
LOC110498285 NA coding upstream 117552 63312561 ~ 63320421 (+)
LOC118941523 NA coding upstream 123727 63309348 ~ 63310641 (+)
fbln5 fbln5 coding downstream 620 63435324 ~ 63500172 (+)
LOC110498294 LOC106599381 coding downstream 72082 63506786 ~ 63534703 (+)
plek2 plek2 coding downstream 123099 63557803 ~ 63565484 (+)
LOC110514319 rbm25 coding downstream 213665 63648369 ~ 63719010 (+)
ccdc177 LOC106586969 coding downstream 758805 64193509 ~ 64201734 (+)
G1647537 NA non-coding upstream 2325 63431758 ~ 63432043 (+)
G1647536 NA non-coding upstream 3198 63430925 ~ 63431170 (+)
G1647532 NA non-coding upstream 8369 63425444 ~ 63425999 (+)
G1647529 NA non-coding upstream 15741 63417131 ~ 63418627 (+)
G1647528 NA non-coding upstream 19961 63413473 ~ 63414407 (+)
G1647550 NA non-coding downstream 28950 63463654 ~ 63464153 (+)
G1647551 NA non-coding downstream 30961 63465665 ~ 63495384 (+)
G1647553 NA non-coding downstream 49790 63484494 ~ 63484958 (+)
G1647554 NA non-coding downstream 50256 63484960 ~ 63485777 (+)
G1647542 NA non-coding downstream 65718 63500422 ~ 63500866 (+)
G1647477 NA other upstream 230311 63202756 ~ 63204057 (+)
G1647411 NA other upstream 357225 63075149 ~ 63077143 (+)
G1647342 NA other upstream 415680 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 940649 62486921 ~ 62493719 (+)
G1648296 NA other downstream 693504 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1545660 64980364 ~ 64980943 (+)
G1649268 NA other downstream 2027069 65461773 ~ 65463454 (+)
G1649291 NA other downstream 2109673 65544377 ~ 65545055 (+)
G1649309 NA other downstream 2143735 65578439 ~ 65582582 (+)

Expression


Co-expression Network