G1648052


Basic Information

Item Value
gene id G1648052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63691387 ~ 63692032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885799
aggtagtagcgtccgttccactggagagaggaggtagtagcgtccgttcctctggagagaggaggtagtagcgtccgttcctctggagagaggaggtagtagcgtccgttcctctggagagaggaggtagtagcgtccgttcctctggagagaggaggtagtagcgtccgttccgctggagagaggaggtagtagcgtccgttccgttggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885799 True 212 lncRNA 0.58 2 63691387 63692032

Neighbor

gene id symbol gene type direction distance location
plek2 plek2 coding upstream 125903 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 156684 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 191215 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 276805 63380908 ~ 63414582 (+)
rtf1 rtf1 coding upstream 319052 63348949 ~ 63372335 (+)
ccdc177 LOC106586969 coding downstream 501477 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 510188 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 523254 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 789395 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 848253 64540285 ~ 64552914 (+)
G1647584 NA non-coding upstream 43976 63646266 ~ 63647411 (+)
G1647616 NA non-coding upstream 66312 63624718 ~ 63625075 (+)
G1647615 NA non-coding upstream 70390 63620721 ~ 63620997 (+)
G1647613 NA non-coding upstream 73234 63617786 ~ 63618153 (+)
G1647612 NA non-coding upstream 75356 63615658 ~ 63616031 (+)
G1648054 NA non-coding downstream 12409 63704441 ~ 63705010 (+)
G1648045 NA non-coding downstream 27037 63719069 ~ 63723384 (+)
G1648080 NA non-coding downstream 31494 63723526 ~ 63723875 (+)
G1648081 NA non-coding downstream 32018 63724050 ~ 63724261 (+)
G1648082 NA non-coding downstream 33153 63725185 ~ 63725410 (+)
G1647477 NA other upstream 487330 63202756 ~ 63204057 (+)
G1647411 NA other upstream 614244 63075149 ~ 63077143 (+)
G1647342 NA other upstream 672699 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1197668 62486921 ~ 62493719 (+)
G1648296 NA other downstream 436176 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1288332 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1769741 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1852345 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1886407 65578439 ~ 65582582 (+)

Expression


Co-expression Network