G1648054


Basic Information

Item Value
gene id G1648054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63704441 ~ 63705010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885801
AAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCCAAATACTACAGGTGAGACGAGTCAAAATACTACAGGTGAGAC

Function

NR:

description
PREDICTED: clumping factor B-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885801 True 450 lncRNA 0.44 2 63704441 63705010

Neighbor

gene id symbol gene type direction distance location
plek2 plek2 coding upstream 138957 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 169738 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 204269 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 289859 63380908 ~ 63414582 (+)
rtf1 rtf1 coding upstream 332106 63348949 ~ 63372335 (+)
ccdc177 LOC106586969 coding downstream 488499 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 497210 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 510276 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 776417 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 835275 64540285 ~ 64552914 (+)
G1648052 NA non-coding upstream 12409 63691387 ~ 63692032 (+)
G1647584 NA non-coding upstream 57030 63646266 ~ 63647411 (+)
G1647616 NA non-coding upstream 79366 63624718 ~ 63625075 (+)
G1647615 NA non-coding upstream 83444 63620721 ~ 63620997 (+)
G1647613 NA non-coding upstream 86288 63617786 ~ 63618153 (+)
G1648045 NA non-coding downstream 14059 63719069 ~ 63723384 (+)
G1648080 NA non-coding downstream 18516 63723526 ~ 63723875 (+)
G1648081 NA non-coding downstream 19040 63724050 ~ 63724261 (+)
G1648082 NA non-coding downstream 20175 63725185 ~ 63725410 (+)
G1648088 NA non-coding downstream 55463 63760473 ~ 63767270 (+)
G1647477 NA other upstream 500384 63202756 ~ 63204057 (+)
G1647411 NA other upstream 627298 63075149 ~ 63077143 (+)
G1647342 NA other upstream 685753 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1210722 62486921 ~ 62493719 (+)
G1648296 NA other downstream 423198 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1275354 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1756763 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1839367 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1873429 65578439 ~ 65582582 (+)

Expression


Co-expression Network