G1648080


Basic Information

Item Value
gene id G1648080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 63723526 ~ 63723875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1885841
TGGGGCCCTGTGGAGGAGAAGGGTTGAGGTTGGGGCCCTGTGGAGGAGAAGGGTTGAGTTTGGGGCCCTGTGGAAGGGCACTAGTATAAAACCTGGAACACTTGGAGCCCGTTTCCGGCATTCAGATTAAAAGCCCAGTGCTGCATGGACTAAAAACACTTTCAATTTATAATCTCTTTTTCAGTCCAGGACTGGTCTTAATTAAcctgggtctgggaaactggcccctTAACTCTGAACCGCCAAACAGCCCTTAGGTCTTCAGCATCTATGGAAAAGGACTGTCGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1885841 True 289 lncRNA 0.50 2 63723526 63723875

Neighbor

gene id symbol gene type direction distance location
LOC110514319 rbm25 coding upstream 4516 63648369 ~ 63719010 (+)
plek2 plek2 coding upstream 158042 63557803 ~ 63565484 (+)
LOC110498294 LOC106599381 coding upstream 188823 63506786 ~ 63534703 (+)
fbln5 fbln5 coding upstream 223354 63435324 ~ 63500172 (+)
LOC110498409 LOC106592792 coding upstream 308944 63380908 ~ 63414582 (+)
ccdc177 LOC106586969 coding downstream 469634 64193509 ~ 64201734 (+)
LOC118941525 NA coding downstream 478345 64202220 ~ 64215617 (+)
LOC118941526 NA coding downstream 491411 64215286 ~ 64220569 (+)
LOC118941371 NA coding downstream 757552 64481427 ~ 64482263 (+)
LOC118941527 ERH coding downstream 816410 64540285 ~ 64552914 (+)
G1648045 NA non-coding upstream 142 63719069 ~ 63723384 (+)
G1648054 NA non-coding upstream 18516 63704441 ~ 63705010 (+)
G1648052 NA non-coding upstream 31494 63691387 ~ 63692032 (+)
G1647584 NA non-coding upstream 76115 63646266 ~ 63647411 (+)
G1647616 NA non-coding upstream 98451 63624718 ~ 63625075 (+)
G1648081 NA non-coding downstream 175 63724050 ~ 63724261 (+)
G1648082 NA non-coding downstream 1310 63725185 ~ 63725410 (+)
G1648088 NA non-coding downstream 36598 63760473 ~ 63767270 (+)
G1648090 NA non-coding downstream 44431 63768306 ~ 63768855 (+)
G1648091 NA non-coding downstream 45024 63768899 ~ 63770171 (+)
G1647477 NA other upstream 519469 63202756 ~ 63204057 (+)
G1647411 NA other upstream 646383 63075149 ~ 63077143 (+)
G1647342 NA other upstream 704838 63016955 ~ 63018688 (+)
srsf5a LOC106611464 other upstream 1229807 62486921 ~ 62493719 (+)
G1648296 NA other downstream 404333 64128208 ~ 64129068 (+)
G1648608 NA other downstream 1256489 64980364 ~ 64980943 (+)
G1649268 NA other downstream 1737898 65461773 ~ 65463454 (+)
G1649291 NA other downstream 1820502 65544377 ~ 65545055 (+)
G1649309 NA other downstream 1854564 65578439 ~ 65582582 (+)

Expression


Co-expression Network