G1737815


Basic Information

Item Value
gene id G1737815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 40461354 ~ 40461650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1990183
ctttttggagtactgcccatgggtacccccctatcaagaatccagtcggacactgttgcttatacaactcttttagctagacggctaatactacagaactggaagatggcagctcccccatcttataaatattgggtgagagatgtgttgtgctctctgaaactagaaaaaattcaattcatttcacgtgggaaccccaaactgtttaatgaggcttgggctccattccggtcttactttaaacagtccatcctctgatggcattccaattaaAACTAAAATAAGTCTGTATTTGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1990183 True 297 lncRNA 0.42 1 40461354 40461650

Neighbor

gene id symbol gene type direction distance location
LOC110500409 LOC106599480 coding upstream 56514 40401452 ~ 40404840 (+)
LOC110500405 LOC100194596 coding upstream 108465 40322170 ~ 40352889 (+)
LOC118942929 NA coding upstream 204309 40255990 ~ 40257045 (+)
LOC110500400 LOC106608974 coding upstream 266880 40166092 ~ 40194474 (+)
LOC110500398 LOC106608973 coding upstream 302779 40137626 ~ 40158575 (+)
LOC110500418 NA coding downstream 332799 40794449 ~ 40837182 (+)
LOC110500419 LOC106608987 coding downstream 385342 40846992 ~ 40855143 (+)
LOC110500424 LOC106608992 coding downstream 588539 41050189 ~ 41058764 (+)
LOC110500425 LOC106608993 coding downstream 646796 41108446 ~ 41125934 (+)
LOC110500427 LOC106608994 coding downstream 669176 41130826 ~ 41183998 (+)
G1737789 LOC106608978 non-coding upstream 24144 40435318 ~ 40437210 (+)
G1737519 LOC106608979 non-coding upstream 73117 40386954 ~ 40388237 (+)
G1737449 NA non-coding upstream 81688 40270818 ~ 40379666 (+)
G1737422 NA non-coding upstream 232039 40220359 ~ 40229315 (+)
G1737816 NA non-coding downstream 703 40462353 ~ 40468149 (+)
G1737821 NA non-coding downstream 12953 40474603 ~ 40474831 (+)
G1737825 NA non-coding downstream 16827 40478477 ~ 40478687 (+)
G1737831 NA non-coding downstream 28839 40490489 ~ 40490774 (+)
G1737832 NA non-coding downstream 30891 40492541 ~ 40492795 (+)
G1737353 NA other upstream 398029 40062706 ~ 40063325 (+)
G1736484 LOC106608963 other upstream 584404 39875756 ~ 39876950 (+)
G1736098 NA other upstream 1171684 39233664 ~ 39289670 (+)
nat16 LOC106608942 other upstream 1251869 39179147 ~ 39211035 (+)
G1737866 LOC103384823 other downstream 90361 40552011 ~ 40553853 (+)
G1738057 LOC100194703 other downstream 531505 40955050 ~ 40997320 (+)
G1738119 NA other downstream 563060 41024710 ~ 41029136 (+)
G1739103 NA other downstream 1427161 41888811 ~ 41897856 (+)
cxcl8c cxcl8c other downstream 1823406 42285056 ~ 42288500 (+)

Expression


Co-expression Network