Gene
RNA
| Item | Value |
|---|---|
| gene id | G1737832 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40492541 ~ 40492795 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1990201 | True | 255 | lncRNA | 0.53 | 1 | 40492541 | 40492795 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500409 | LOC106599480 | coding | upstream | 87701 | 40401452 ~ 40404840 (+) |
| LOC110500405 | LOC100194596 | coding | upstream | 139652 | 40322170 ~ 40352889 (+) |
| LOC118942929 | NA | coding | upstream | 235496 | 40255990 ~ 40257045 (+) |
| LOC110500400 | LOC106608974 | coding | upstream | 298067 | 40166092 ~ 40194474 (+) |
| LOC110500398 | LOC106608973 | coding | upstream | 333966 | 40137626 ~ 40158575 (+) |
| LOC110500418 | NA | coding | downstream | 301654 | 40794449 ~ 40837182 (+) |
| LOC110500419 | LOC106608987 | coding | downstream | 354197 | 40846992 ~ 40855143 (+) |
| LOC110500424 | LOC106608992 | coding | downstream | 557394 | 41050189 ~ 41058764 (+) |
| LOC110500425 | LOC106608993 | coding | downstream | 615651 | 41108446 ~ 41125934 (+) |
| LOC110500427 | LOC106608994 | coding | downstream | 638031 | 41130826 ~ 41183998 (+) |
| G1737831 | NA | non-coding | upstream | 1767 | 40490489 ~ 40490774 (+) |
| G1737825 | NA | non-coding | upstream | 13854 | 40478477 ~ 40478687 (+) |
| G1737821 | NA | non-coding | upstream | 17710 | 40474603 ~ 40474831 (+) |
| G1737816 | NA | non-coding | upstream | 24392 | 40462353 ~ 40468149 (+) |
| G1737815 | NA | non-coding | upstream | 30891 | 40461354 ~ 40461650 (+) |
| G1737794 | NA | non-coding | downstream | 933 | 40493728 ~ 40498209 (+) |
| G1737845 | LOC106608980 | non-coding | downstream | 23186 | 40515981 ~ 40520844 (+) |
| G1737865 | NA | non-coding | downstream | 55399 | 40548194 ~ 40550620 (+) |
| G1737905 | NA | non-coding | downstream | 119304 | 40612099 ~ 40675623 (+) |
| G1737923 | NA | non-coding | downstream | 161985 | 40654780 ~ 40682814 (+) |
| G1737353 | NA | other | upstream | 429216 | 40062706 ~ 40063325 (+) |
| G1736484 | LOC106608963 | other | upstream | 615591 | 39875756 ~ 39876950 (+) |
| G1736098 | NA | other | upstream | 1202871 | 39233664 ~ 39289670 (+) |
| nat16 | LOC106608942 | other | upstream | 1283056 | 39179147 ~ 39211035 (+) |
| G1737866 | LOC103384823 | other | downstream | 59216 | 40552011 ~ 40553853 (+) |
| G1738057 | LOC100194703 | other | downstream | 500360 | 40955050 ~ 40997320 (+) |
| G1738119 | NA | other | downstream | 531915 | 41024710 ~ 41029136 (+) |
| G1739103 | NA | other | downstream | 1396016 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 1792261 | 42285056 ~ 42288500 (+) |
