Gene
RNA
| Item | Value |
|---|---|
| gene id | G1737821 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 40474603 ~ 40474831 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1990190 | True | 229 | lncRNA | 0.43 | 1 | 40474603 | 40474831 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500409 | LOC106599480 | coding | upstream | 69763 | 40401452 ~ 40404840 (+) |
| LOC110500405 | LOC100194596 | coding | upstream | 121714 | 40322170 ~ 40352889 (+) |
| LOC118942929 | NA | coding | upstream | 217558 | 40255990 ~ 40257045 (+) |
| LOC110500400 | LOC106608974 | coding | upstream | 280129 | 40166092 ~ 40194474 (+) |
| LOC110500398 | LOC106608973 | coding | upstream | 316028 | 40137626 ~ 40158575 (+) |
| LOC110500418 | NA | coding | downstream | 319618 | 40794449 ~ 40837182 (+) |
| LOC110500419 | LOC106608987 | coding | downstream | 372161 | 40846992 ~ 40855143 (+) |
| LOC110500424 | LOC106608992 | coding | downstream | 575358 | 41050189 ~ 41058764 (+) |
| LOC110500425 | LOC106608993 | coding | downstream | 633615 | 41108446 ~ 41125934 (+) |
| LOC110500427 | LOC106608994 | coding | downstream | 655995 | 41130826 ~ 41183998 (+) |
| G1737816 | NA | non-coding | upstream | 6454 | 40462353 ~ 40468149 (+) |
| G1737815 | NA | non-coding | upstream | 12953 | 40461354 ~ 40461650 (+) |
| G1737789 | LOC106608978 | non-coding | upstream | 37393 | 40435318 ~ 40437210 (+) |
| G1737519 | LOC106608979 | non-coding | upstream | 86366 | 40386954 ~ 40388237 (+) |
| G1737825 | NA | non-coding | downstream | 3646 | 40478477 ~ 40478687 (+) |
| G1737831 | NA | non-coding | downstream | 15658 | 40490489 ~ 40490774 (+) |
| G1737832 | NA | non-coding | downstream | 17710 | 40492541 ~ 40492795 (+) |
| G1737794 | NA | non-coding | downstream | 18897 | 40493728 ~ 40498209 (+) |
| G1737845 | LOC106608980 | non-coding | downstream | 41150 | 40515981 ~ 40520844 (+) |
| G1737353 | NA | other | upstream | 411278 | 40062706 ~ 40063325 (+) |
| G1736484 | LOC106608963 | other | upstream | 597653 | 39875756 ~ 39876950 (+) |
| G1736098 | NA | other | upstream | 1184933 | 39233664 ~ 39289670 (+) |
| nat16 | LOC106608942 | other | upstream | 1265118 | 39179147 ~ 39211035 (+) |
| G1737866 | LOC103384823 | other | downstream | 77180 | 40552011 ~ 40553853 (+) |
| G1738057 | LOC100194703 | other | downstream | 518324 | 40955050 ~ 40997320 (+) |
| G1738119 | NA | other | downstream | 549879 | 41024710 ~ 41029136 (+) |
| G1739103 | NA | other | downstream | 1413980 | 41888811 ~ 41897856 (+) |
| cxcl8c | cxcl8c | other | downstream | 1810225 | 42285056 ~ 42288500 (+) |
