XLOC_003874 (abhd8b)


Basic Information

Item Value
gene id XLOC_003874
gene name abhd8b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 5933635 ~ 5939861 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007427
TCTACGCTGATCATTTAGAAACCAAGGAACCCAAATGGAAGAGAAATAATCGCTTTAATGATCATAGGAAGGTTTTTTTTTGGCTTAAACAAACATGGTGTGGTATAAAGATGTGTATAAAGGAAGACTTGCAGTCTGTTAAACAGTTGAAATGTGAAGATAtccaaaatccaacgtccagcATCAAGGGAAGGCAGCATTGCTGAACACTCTGAGGTACATTTTTGGCAGGAGGAACTGAGTAACCCAGCACatggtaaattaaattaatggaTTAATTTCAATGTGTTTACAGATCCTGGATCAGCCAAACTATGGTGTGCCAGTCCAAATAAGCAGAAAAGCAAGTACTAAACTGTTTTAAGAACCAGCAATGTTTCTTGTTTCCCCAGGTGTTCACCATGCTCACCAGCTTTGTGGACGGAATATTCTGCTGCTTTACAGGGAAGTCTACCAACGTGGTTGTCCCTGTCGAGTCCTCTGAGCCCACAGATGGTTTTGAATTTGTTGAAGTAAAGCCAGGACGAGTTTTGAGAGTTCGACACATCATCCCAGACCGACCTGTGGTTGAGGAGCCAGGGACTGGGGAAGGCGGTACAGTGAGCTGCAAGCGTAAAATCTCAGTGTACAGAAACGGACAGCTTCTTATTGAGAATGTCAACGAAGCCACGCACCCAGAGCTGGTGCGCTATCAGAATGGAGACAGCACTGTGGATATGGAGGTCTCCAACTGTGAGTCTCCTGTGGTAGGCCAGGCTACTGAGACCCCAGCAGGAGGACAGGCTGCAGAAACCAAACCTGCCCCACAGGAACAGCAGCAGGTGCACCGTAGGCGCCGAAAACCCAAACGCTCAATCGTGATCGACTGTGAGCGGAAGATTACTTGCTGCAAAGGTACTCATCCCGACGTGGCTTTGTTTTTCATACACGGCGTTGGGGGATCACTGGATATCTGGAGAAGCCAGCTGGACTTTTTCTCCCAACTTGGATATGAAGTCATCGCCATGGACCTGGCCGGCCACGGTGCAAGCTCAGCCCCTCGCATTCCTGCTGCCTATACCTTTTATGCTCTGGCTGAGGACGTCAGAATCATATTCAAGCGATATGCGAAGCGGAGGAATATTTTAGTTGGACACTCATATGGAGTCTCATTTTGCACCTTCCTGGCTCATGAATATCCAGAACAGGTTCATAAACTTGTGATGATAAATGGCGGCGGGCCCACAGCACTCGAGCCCAGTCTCTGCTCTGTCTTCAACTTGCCCACATGTGTCCTTAATTTTCTGTCCCCGTGCCTCACCTGGAGCTTCCTCATGGCTGGGTTTGCCCATCAGGGAACAAGGGAAAAGAAATTACTGAAAGAGAACAATGCCTTCAACGTGTCTTCCTTCGTTCTGAGGTCCATGATGAGTGGACAGTACTGGCCGGAGGGTGACGAGGTTTACCATGCTGAAATCACAGTGCCTGTTCTGCTGGTTCACGGCATGTATGACAAGTTTGTACCAGTTCAAGAGGACCAGCGCATGGCAGAGATCCTCTTGCTGGGTTTCCTGAAGGTTCTGGATGACGGAAGCCACATGGTCATGATGGAGTGTCCTGATGTAGTCAACACTCTGTTACACGAGTTCTTCTTGTGGCAGCCAGCAACCGCCTCAAAGCCCAAACAGGAAGCAGCGCCGACAAAGACCAACACCAAATCTCCAGAAGACACATCCAGACCTAAAACTGCCCCGAAATCACCCTCCAAATCTCAACCTGATTTGCTAAGACCGACAACTGCACCTAAAACAACCAACATCGCCACAGAAGCCCCGGCAGTAGCGGACATCAAATCTAAGGGCAAGAAATAACTGCTTTTCCCAATATACATGTGCTGGGGTAAAGCATTGGGCTCGTGTGATAGAACAAGTTTAATGGAGCTTTCTGAACATTGGATATCACTGGATATTCACCAGctggtttaaaacagttggtCTAAAAGCACGAGGGTCTACTTTAATAATTCCAGTTTTGGAGCAGGATGATTCCTAGAGGTTGTCTTCTTTTCTGTGACACAGTCCTTTCCAAGTGATTTTTATTTCTACCATGGGATATTATATATACTTGTATGCCATATGATGTCAATTTTAAGGCTGAAAATGTCACATTACATAAGGGATGAATATAAGCACTGCTGCCGCTGTTGAATCTAATAgactaatattttgtatttatttatgccagtttttttttttatttgactacATCAGCTGATGTCCATCAGTTCATACATGGGTCTTCCTCTCTGTTAAAGTTTTATTTGAAACGTTCATTAGTGAAGTGTTTTTACGTTCAGATGACTCCAGCACTGTTGCTGAAATACTGTCAGATACGGTGACTTTACAATAAAAGCCATCAACTTGA
>TCONS_00007428
ATGCTCACCAGCTTTGTGGACGGAATATTCTGCTGCTTTACAGGGAAGTCTACCAACGTGGTTGTCCCTGTCGAGTCCTCTGAGCCCACAGATGGTTTTGAATTTGTTGAAGTAAAGCCAGGACGAGTTTTGAGAGTTCGACACATCATCCCAGACCGACCTGTGGTTGAGGAGCCAGGGACTGGGGAAGGCGGTACAGTGAGCTGCAAGCGTAAAATCTCAGTGTACAGAAACGGACAGCTTCTTATTGAGAATGTCAACGAAGCCACGCACCCAGAGCTGGTGCGCTATCAGAATGGAGACAGCACTGTGGATATGGAGGTCTCCAACTGTGAGTCTCCTGTGGTAGGAGGACAGGCTGCAGAAACCAAACCTGTGCACCGTAGGCGCCGAAAACCCAAACGCTCAATCGTGATCGACTGTGAGCGGAAGATTACTTGCTGCAAAGGTACTCATCCCGACGTGGCTTTGTTTTTCATACACGGCGTTGGGGGATCACTGGATATCTGGAGAAGCCAGCTGGACTTTTTCTCCCAACTTGGATATGAAGTCATCGCCATGGACCTGGCCGGCCACGGTGCAAGCTCAGCCCCTCGCATTCCTGCTGCCTATACCTTTTATGCTCTGGCTGAGGACGTCAGAATCATATTCAAGCGATATGCGAAGCGGAGGAATATTTTAGTTGGACACTCATATGGAGTCTCATTTTGCACCTTCCTGGCTCATGAATATCCAGAACAGGTTCATAAACTTGTGATGATAAATGGCGGCGGGCCCACAGCACTCGAGCCCAGTCTCTGCTCTGTCTTCAACTTGCCCACATGTGTCCTTAATTTTCTGTCCCCGTGCCTCACCTGGAGCTTCCTCATGGCTGGGTTTGCCCATCAGGGAACAAGGGAAAAGAAATTACTGAAAGAGAACAATGCCTTCAACGTGTCTTCCTTCGTTCTGAGGTCCATGATGAGTGGACAGTACTGGCCGGAGGGTGACGAGGTTTACCATGCTGAAATCACAGTGCCTGTTCTGCTGGTTCACGGCATGTATGACAAGTTTGTACCAGTTCAAGAGGACCAGCGCATGGCAGAGATCCTCTTGCTGGGTTTCCTGAAGGTTCTGGATGACGGAAGCCACATGGTCATGATGGAGTGTCCTGATGTAGTCAACACTCTGTTACACGAGTTCTTCTTGTGGCAGCCAGCAACCGCCTCAAAGCCCAAACAGGAAGCAGCGCCGACAAAGACCAACACCAAATCTCCAGAAGACACATCCAGACCTAAAACTGCCCCGAAATCACCCTCCAAATCTCAACCTGATTTGCTAAGACCGACAACTGCACCTAAAACAACCAACATCGCCACAGAAGCCCCGGCAGTAGCGGACATCAAATCTAAGGGCAAGAAATAA

Function

symbol description
abhd8b Predicted to enable catalytic activity. Orthologous to human ABHD8 (abhydrolase domain containing 8).

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-130530-805 Predicted to enable catalytic activity. Orthologous to human ABHD8 (abhydrolase domain containing 8).

Ensembl:

ensembl_id ENSDARG00000076620

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007427 False 2403 mRNA 0.46 4 5933635 5939861
TCONS_00007428 True 1404 mRNA 0.51 6 5934188 5939460

Neighbor

gene id symbol gene type direction distance location
XLOC_003873 gamt coding downstream 67891 5855923 ~ 5865744 (-)
XLOC_003872 NA coding downstream 158733 5773096 ~ 5774902 (-)
XLOC_003871 pex11g coding downstream 370137 5554163 ~ 5563498 (-)
XLOC_003870 NA coding downstream 418471 5514378 ~ 5515164 (-)
XLOC_003868 NA coding downstream 1001636 4492467 ~ 4931999 (-)
XLOC_003875 dda1 coding upstream 5325 5945186 ~ 5953648 (-)
XLOC_003876 NA coding upstream 17148 5957009 ~ 5964371 (-)
XLOC_003877 ano8b coding upstream 25307 5965168 ~ 6001845 (-)
XLOC_003878 NA coding upstream 65946 6005807 ~ 6006741 (-)
XLOC_003879 plvapb coding upstream 103881 6043742 ~ 6048490 (-)
XLOC_003938 BX324177.10 misc upstream 5398943 11338804 ~ 11339100 (-)
XLOC_003942 BX324177.17 misc upstream 5427733 11367594 ~ 11367890 (-)
XLOC_003943 BX324177.3 misc upstream 5430594 11370455 ~ 11370653 (-)
XLOC_003944 BX324177.4 misc upstream 5441043 11380904 ~ 11381204 (-)
XLOC_003945 BX324177.6 misc upstream 5443972 11383833 ~ 11384130 (-)
XLOC_003869 NA non-coding downstream 1081487 4809715 ~ 4852148 (-)
XLOC_003867 NA non-coding downstream 1462961 4435273 ~ 4470674 (-)
XLOC_003881 CT573239.1 non-coding upstream 132099 6071960 ~ 6072066 (-)
XLOC_003882 NA non-coding upstream 146439 6086300 ~ 6096366 (-)
XLOC_003886 NA non-coding upstream 337039 6276900 ~ 6278698 (-)

Expression


Co-expression Network