Gene
RNA
| Item | Value |
|---|---|
| gene id | G2028320 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048590.1 |
| NCBI id | CM023244.2 |
| chromosome length | 51113553 |
| location | 38701448 ~ 38705781 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: repetitive proline-rich cell wall protein 2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2319816 | True | 419 | lncRNA | 0.58 | 5 | 38701448 | 38705781 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110506757 | LOC106562446 | coding | downstream | 197292 | 38411123 ~ 38504156 (-) |
| LOC110506753 | LOC106587607 | coding | downstream | 327688 | 38334242 ~ 38373760 (-) |
| LOC110506754 | LOC106587610 | coding | downstream | 368177 | 38300633 ~ 38333271 (-) |
| LOC110506750 | LOC106562417 | coding | downstream | 478795 | 38126089 ~ 38222653 (-) |
| LOC110506749 | NA | coding | downstream | 642426 | 38056139 ~ 38059022 (-) |
| LOC110526638 | LOC107739100 | coding | upstream | 96558 | 38802339 ~ 38819334 (-) |
| LOC110506764 | LOC106587718 | coding | upstream | 329163 | 39034944 ~ 39042496 (-) |
| LOC110506767 | NA | coding | upstream | 347292 | 39053073 ~ 39054291 (-) |
| LOC110506765 | sc11a | coding | upstream | 354519 | 39060300 ~ 39068583 (-) |
| LOC110506758 | LOC106587719 | coding | upstream | 378554 | 39084335 ~ 39102425 (-) |
| G2028297 | NA | non-coding | downstream | 6127 | 38655694 ~ 38695321 (-) |
| G2028262 | NA | non-coding | downstream | 21760 | 38678067 ~ 38679688 (-) |
| G2028308 | NA | non-coding | downstream | 30863 | 38667503 ~ 38670585 (-) |
| G2028198 | NA | non-coding | downstream | 194107 | 38507090 ~ 38507341 (-) |
| G2028195 | NA | non-coding | downstream | 196592 | 38504569 ~ 38504856 (-) |
| G2028350 | NA | non-coding | upstream | 65240 | 38771021 ~ 38771706 (-) |
| G2028354 | NA | non-coding | upstream | 71358 | 38777139 ~ 38854931 (-) |
| G2028360 | LOC106587632 | non-coding | upstream | 83534 | 38789315 ~ 38791582 (-) |
| G2028376 | NA | non-coding | upstream | 120357 | 38826138 ~ 38827636 (-) |
| G2028405 | LOC107662719 | non-coding | upstream | 169452 | 38875233 ~ 38875473 (-) |
| G2027052 | NA | other | downstream | 1210032 | 37490852 ~ 37491416 (-) |
| G2026993 | NA | other | downstream | 1280411 | 37420411 ~ 37421037 (-) |
| LOC110506740 | LOC106562403 | other | downstream | 1825345 | 36793286 ~ 36913660 (-) |
| G2028777 | LOC106587714 | other | upstream | 520582 | 39226363 ~ 39227059 (-) |
| G2028779 | NA | other | upstream | 523348 | 39229129 ~ 39233948 (-) |
| pldn | pldn | other | upstream | 1493035 | 40197134 ~ 40200916 (-) |
| LOC110506132 | LOC106562499 | other | upstream | 1561468 | 40213044 ~ 40269852 (-) |
| G2029844 | NA | other | upstream | 1801965 | 40507746 ~ 40508282 (-) |
