G2029579


Basic Information

Item Value
gene id G2029579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048590.1
NCBI id CM023244.2
chromosome length 51113553
location 40166662 ~ 40167388 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2321340
gattcacacagtctcctctgaacagttgatgttgagatgtgtctgttacttgaactctgtgaaacatttatatgggctgcaatttctgagactggtaactctaatgaacatatcctctgatGCTGAGGtaatgggtcttcctttcctgtggcggtcctcacaagagccagtttcatcatagcgcttgatggttttttggGACtgcaagttcttgaaatgttccctattgactgaccttcatgtcttaaagcaaatatggactgtcatttctctttgcttaggttgtttttgccataatatggactcagtcttttaccaaatagggctatcttctgtatatcacccctatcttgtcacaacacaactgattggctcaaatgcattaaggaaatcaattcaaatttaagttaacaaggcacacctgttaattgaaatgcattccaggtgactacctcatgaagctggttgagagaatgccaagagtgtgcaaaggatgtcctcaaggcaaagggtggctactttgaagaatctcaaatctcaaatatattttgatatatttgacattttttgggttactacctgattccatatgtgttatttcatagtttgtatgtcttcactattattctacaatgtagaaaatagtaagaatacagaaaaacccttgaataagtaagTGATTACCtatgcaaacttttgactggtcctgtactTATGGTCTTAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2321340 True 727 lncRNA 0.38 1 40166662 40167388

Neighbor

gene id symbol gene type direction distance location
LOC110526651 LOC106562502 coding downstream 15886 40138871 ~ 40150776 (-)
LOC110513022 LOC106587669 coding downstream 29971 40044093 ~ 40136691 (-)
LOC110516672 NA coding downstream 122965 40039396 ~ 40043697 (-)
LOC118944392 NA coding downstream 357899 39807917 ~ 39808763 (-)
LOC110506772 LOC106562440 coding downstream 900450 39257054 ~ 39266212 (-)
pldn pldn coding upstream 29746 40197134 ~ 40200916 (-)
LOC110506132 LOC106562499 coding upstream 46024 40213044 ~ 40269852 (-)
LOC110506134 LOC106587633 coding upstream 128736 40296124 ~ 40307911 (-)
LOC110519217 LOC106587666 coding upstream 168156 40335544 ~ 40365947 (-)
dut dut coding upstream 496130 40663518 ~ 40667842 (-)
G2029572 NA non-coding downstream 6463 40159829 ~ 40160199 (-)
G2029560 NA non-coding downstream 7408 40151643 ~ 40159254 (-)
G2029570 NA non-coding downstream 29626 40136822 ~ 40137036 (-)
G2029555 NA non-coding downstream 91900 40073900 ~ 40074762 (-)
G2029558 NA non-coding upstream 275 40167663 ~ 40172576 (-)
G2029580 NA non-coding upstream 6979 40174367 ~ 40176017 (-)
G2029581 NA non-coding upstream 9286 40176674 ~ 40177272 (-)
G2029582 NA non-coding upstream 11819 40179207 ~ 40179796 (-)
G2029583 NA non-coding upstream 20693 40188081 ~ 40188338 (-)
G2028779 NA other downstream 935852 39229129 ~ 39233948 (-)
G2028777 LOC106587714 other downstream 939603 39226363 ~ 39227059 (-)
LOC110506757 LOC106562446 other downstream 1662527 38411123 ~ 38504156 (-)
LOC110506753 LOC106587607 other downstream 1818306 38334242 ~ 38373760 (-)
G2027052 NA other downstream 2675246 37490852 ~ 37491416 (-)
G2029844 NA other upstream 340358 40507746 ~ 40508282 (-)
G2029858 fbn1 other upstream 383791 40551179 ~ 40567512 (-)
G2030106 NA other upstream 608326 40775714 ~ 40778988 (-)

Expression


Co-expression Network