G2078948


Basic Information

Item Value
gene id G2078948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36697778 ~ 36698244 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377016
AGTGACTCTGCCCTTCACGATTTGTCCTCGAGGATCTTTGAGAAGTGGAGAAGAACCTCAACTTTAGCTTATTGGAGGAGCCTTTGTAATACTGCTCTCCCTTCTCCTGTTCAATGAGACCTTACAAGACTAGTCACCTACAGCAGGGAGGAAGGAGATAAGGGCTTGGTTTGGAATCAGACCTctcttcttgtttctctctctctgagtgatcAATGTTAAGTTGACCTCTCCTGTGACGAGTGCTGTTGTAAGCTTCTGCTTTCCACACTCAAacactcagacaaacacacacactcagacaaacaaacacacacactcagacaaacacacacactcagacaaacacacacactcagacaaacacacacacacagacaaacacacacactcagacaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377016 True 401 lncRNA 0.45 2 36697778 36698244

Neighbor

gene id symbol gene type direction distance location
LOC118944683 NA coding upstream 79052 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 151281 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 257069 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 316767 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 685444 36005425 ~ 36012334 (+)
LOC110507948 LOC106581405 coding downstream 9682 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 332917 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 620472 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 807317 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 807485 37505729 ~ 37505802 (+)
G2078942 NA non-coding upstream 15569 36681541 ~ 36682209 (+)
G2078933 NA non-coding upstream 22255 36675321 ~ 36675523 (+)
G2078911 NA non-coding upstream 31965 36665055 ~ 36665813 (+)
G2078872 NA non-coding upstream 100075 36597385 ~ 36597703 (+)
G2078871 NA non-coding upstream 101056 36596507 ~ 36596722 (+)
G2078949 NA non-coding downstream 3176 36701420 ~ 36701951 (+)
G2078959 NA non-coding downstream 6741 36704985 ~ 36705523 (+)
G2078960 NA non-coding downstream 9052 36707296 ~ 36707520 (+)
G2078984 NA non-coding downstream 44475 36742719 ~ 36743545 (+)
G2078985 NA non-coding downstream 47392 36745636 ~ 36748150 (+)
G2078493 NA other upstream 395736 36263506 ~ 36302664 (+)
G2078425 NA other upstream 593677 36102874 ~ 36104101 (+)
G2078382 NA other upstream 663779 36033285 ~ 36033999 (+)
G2078296 NA other upstream 765269 35932115 ~ 35932509 (+)
G2079197 NA other downstream 580861 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 668495 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1117634 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1246688 37944932 ~ 37945151 (+)

Expression


Co-expression Network