G2078959


Basic Information

Item Value
gene id G2078959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36704985 ~ 36705523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377032
ggttttcatcagtgaaatctctgtactttgctccattcatctttcccttaatcTTGCCCAAGACAAGGGCCTAGTCTAAAACCCAGTTTAAGCCTCGTGTTTTTTAAAAGTGTGtcaatttttgttttgttttgtccagCACTGTAAATAAGGCAAACGATGACCTGTTGCCTGGCTACCTGTCCACATCACTGGCCAAACTGATGTTTCTTCTCCACAATGAGTCTGGATTTGTCTCCCTCCCCTATAAGTTATAGAACGCAAACACATTCTgactgttctgattggtcccacAAACCAATGGGTTGGGCAAGAGCTGGCCTACATGACATAAGCAACGTATATGTTTTCAATGGTTAGATTTGTTAGAGACGATCCAATCGCTGAATAATTCGTTTTATACAACGCCCCTCATTTTGAAATTAAGTCTCACAAATGTCTTCTAGGATGGCAGATTCAGACAATGTATGTAGCGACTGATAGAGCAGTGAAATTAAATTCAGGGTTAGTCATCAGGCAACTACGACCTGGAACCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377032 True 539 lncRNA 0.42 1 36704985 36705523

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 1462 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 86259 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 158488 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 264276 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 323974 36365655 ~ 36381011 (+)
LOC110507948 LOC106581405 coding downstream 2403 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 325638 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 613193 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 800038 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 800206 37505729 ~ 37505802 (+)
G2078949 NA non-coding upstream 3034 36701420 ~ 36701951 (+)
G2078948 NA non-coding upstream 6741 36697778 ~ 36698244 (+)
G2078942 NA non-coding upstream 22776 36681541 ~ 36682209 (+)
G2078933 NA non-coding upstream 29462 36675321 ~ 36675523 (+)
G2078911 NA non-coding upstream 39172 36665055 ~ 36665813 (+)
G2078960 NA non-coding downstream 1773 36707296 ~ 36707520 (+)
G2078984 NA non-coding downstream 37196 36742719 ~ 36743545 (+)
G2078985 NA non-coding downstream 40113 36745636 ~ 36748150 (+)
G2078986 NA non-coding downstream 40495 36746018 ~ 36746802 (+)
G2078989 NA non-coding downstream 46082 36751605 ~ 36754762 (+)
G2078493 NA other upstream 402943 36263506 ~ 36302664 (+)
G2078425 NA other upstream 600884 36102874 ~ 36104101 (+)
G2078382 NA other upstream 670986 36033285 ~ 36033999 (+)
G2078296 NA other upstream 772476 35932115 ~ 35932509 (+)
G2079197 NA other downstream 573582 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 661216 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1110355 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1239409 37944932 ~ 37945151 (+)

Expression


Co-expression Network