LOC118936607 (LOC106581404)


Basic Information

Item Value
gene id LOC118936607
gene name LOC106581404
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36678773 ~ 36703523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036965308.1
aggatgtgtgtgtgcacgtagcCGAGTGGGCGGTTTCACTTCGATTGTCAATCTTTTATCGCTTCTCTGTGTGTCACCAACGCTGTACTCTTTTCTCCACACTGCACCATCAACCTCGAGGGACCATAGGGGGGCACACAGCGACGCAGGGGAACTGAAATGTAAATGGGCAACGATTGATCATAACCCTCGGACTTGTCAGCCTTTCATTTCCAGCCGAGTCGCGGTGAGACAGCAGAAACATATGGCTCCCTGAAATAGCTGCTGCCGACCATATTGAACTGCAATTGATTCACGCCAGAGGGTCAATAGTGTTATAAGATAAAAGCCGGAAAGCTTCCACTCGTGACTATAGTTTCTATGAAATACATGTTATTTTTATACCGGTTTTTGTGCTTTCTTCGTTTTTGTACGCTTTCGGTGATCCCGCGCAGCTCCCCTTTCTAACACCCATCATAACAAGACTCGGTTTAGCTGGTTGCTTGCTCGGCGATAAATTAAATTAGATGAATAATTCACTCAGAGGATAGAGGAGTGCGTCGTTTAGCCCAGTCACTCTTCACCGGCGCCCGTTCGTCCCAGTTTGCCTCGGGATTGGGTCTCTTCGCCACCGGGAGTTCCCCTACCTCGGCTCGGTCTCGTCGTTGTTCTTCCCGGTGACCTGCAGAAGAGCGAGCTCGCGCTCCTCGCTAACAGATCATGTCGGCGGAGTCTGTGTTGATCCCGGACGACCGGGCATTCAGCAACTTCAAGGAGGAGTGCGGGAGCGAGGAGGGCTGGAGTCTGACCTACAACAAAACTGGCATGACCGTGTGGACCCAGACTAtaggaggagacgaggagaagTCACTCCACAAGATTAAGTGTCGGATGGCGTGTAAGGACGTGCCAGCTGAGACCATGTATGATGTTCTTCATGACATCGAGTACCGGAGGAAATGGGACGCAAACGTCATCGAAACCTTCGATATCGGAAAACTCACTGTTAACGCAGACGTGGGCTACTACTCCTGGAAGTGTCCCAAGCCGCTGAGGAACCGTGACGTCATCACGCTGCGCTCCTGGCTGCCCATGGGCAGTGATTACATCATCATCAACTACTCTGTCAAACATGCAAAATACCCCCCTAAGAAGGACATGGTACGAGCGGTGTCCATCCAGACTGGCTACCTGATCCAGAGCCATGGACCGGACCACTGCACTCTTACCTACCTGGCACATGTGGATCCAAaaggttCACTACCCAAGTGGGTTGTTAACAAGTCTTCCCACTTTCTGGCTCCCAAAgcGATGAAGAAGATCAGTAAGGCGTGTCTAAAGTACGGAGAGTGGAAGCAGAGACACAACCCAGGCTTTAAGCCCTGGCTCTACCCTGAGCAGACTACACTTCCCACAATCCCTGTGTCCGAgcttagcatccagcacgcagaCAGCCTGGAGAACATTGACGAGAGTACACTCAGCGAGATGCAAAcgcgggaggagagagacagcgactAACATCACACATAACACACTCTGTTTTTCCTCTCCAGTCAGTCTCTTTGTCCTGAATCACTGCCCTTATTGTTCATTATAACATGTGTCTCTGGATCACATTGGCTGTCTCCTGTAAAGaatcctgaacacacacacaccggtccgCTCTCTGTTCCTCAACACTACAGATGTATGAATGTATGTAGAGTTCAATCTTAAATACAGATTCCTACAAAGGTTTTCATATTTCA

Function

NR:

description
PREDICTED: PCTP-like protein

GO:

id name namespace
GO:0008289 lipid binding molecular_function

KEGG:

id description
K24142 STARD10; StAR-related lipid transfer protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036965308.1 True 1730 mRNA 0.50 6 36678773 36703523

Neighbor

gene id symbol gene type direction distance location
LOC118944683 NA coding upstream 60047 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 132276 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 238064 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 297762 36365655 ~ 36381011 (+)
LOC110507977 fzd4 coding upstream 666439 36005425 ~ 36012334 (+)
LOC110507948 LOC106581405 coding downstream 4403 36707926 ~ 36863967 (+)
LOC110536894 NA coding downstream 327638 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 615193 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 802038 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 802206 37505729 ~ 37505802 (+)
G2078933 NA non-coding upstream 3250 36675321 ~ 36675523 (+)
G2078911 NA non-coding upstream 12960 36665055 ~ 36665813 (+)
G2078872 NA non-coding upstream 81070 36597385 ~ 36597703 (+)
G2078871 NA non-coding upstream 82051 36596507 ~ 36596722 (+)
G2078855 NA non-coding upstream 98055 36579545 ~ 36580718 (+)
G2078959 NA non-coding downstream 1462 36704985 ~ 36705523 (+)
G2078960 NA non-coding downstream 3773 36707296 ~ 36707520 (+)
G2078984 NA non-coding downstream 39196 36742719 ~ 36743545 (+)
G2078985 NA non-coding downstream 42113 36745636 ~ 36748150 (+)
G2078986 NA non-coding downstream 42495 36746018 ~ 36746802 (+)
G2078493 NA other upstream 376731 36263506 ~ 36302664 (+)
G2078425 NA other upstream 574672 36102874 ~ 36104101 (+)
G2078382 NA other upstream 644774 36033285 ~ 36033999 (+)
G2078296 NA other upstream 746264 35932115 ~ 35932509 (+)
G2079197 NA other downstream 575582 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 663216 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1112355 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1241409 37944932 ~ 37945151 (+)

Expression


Co-expression Network