G2078985


Basic Information

Item Value
gene id G2078985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36745636 ~ 36748150 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377061
CTTCACCCCTAACTCTACAATCTCATTCACCCCTAACCCTGTAATctcctccacccctaaccctacaaactcctccacccctaaccctacaatcTACAAACTCCTTCATCACTAACCCTGCAATCTACAAACTCCTCCACCTCTTCACCCCTGACCCTACAATCTACAAACGCCTTCACCCCTAACCCTGCAATCTACAATCTCCTTCACCCCTAACCCTGTAAtctcctccaaccctaaccctacaaacTCCTCCACCTCTTCACCCCTAACTCTACAATCTACAAACACCTCCACCCCTAACCCTGTAATctcctccacccctaaccctgtaatctcctccacccctaaccctgtaatctcctccacccctaaccctgtaatctcctccacccctaaccctgtaatctcctccacccctaaccctGTAATCTCCCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377061 True 441 lncRNA 0.51 2 36745636 36748150

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 42113 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 126910 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 199139 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 304927 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 364625 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 283011 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 570566 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 757411 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 757579 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 788379 37536529 ~ 37568873 (+)
G2078984 NA non-coding upstream 2091 36742719 ~ 36743545 (+)
G2078960 NA non-coding upstream 38116 36707296 ~ 36707520 (+)
G2078959 NA non-coding upstream 40113 36704985 ~ 36705523 (+)
G2078949 NA non-coding upstream 43685 36701420 ~ 36701951 (+)
G2078948 NA non-coding upstream 47392 36697778 ~ 36698244 (+)
G2078989 NA non-coding downstream 3455 36751605 ~ 36754762 (+)
G2078992 NA non-coding downstream 11112 36759262 ~ 36764082 (+)
G2078994 NA non-coding downstream 13964 36762114 ~ 36766572 (+)
G2078995 NA non-coding downstream 19962 36768112 ~ 36769034 (+)
G2078997 NA non-coding downstream 25445 36773595 ~ 36773882 (+)
G2078493 NA other upstream 443594 36263506 ~ 36302664 (+)
G2078425 NA other upstream 641535 36102874 ~ 36104101 (+)
G2078382 NA other upstream 711637 36033285 ~ 36033999 (+)
G2078296 NA other upstream 813127 35932115 ~ 35932509 (+)
G2079197 NA other downstream 530955 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 618589 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1067728 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1196782 37944932 ~ 37945151 (+)

Expression


Co-expression Network