G2078997


Basic Information

Item Value
gene id G2078997
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36773595 ~ 36773882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377078
cttccatcatacaactaccatcatcattacaactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccacttccatcttcATTTCTTctaccatcatacaactaccatcatacaactaccatcatcattacaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377078 True 224 lncRNA 0.37 2 36773595 36773882

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 70072 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 154869 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 227098 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 332886 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 392584 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 257279 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 544834 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 731679 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 731847 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 762647 37536529 ~ 37568873 (+)
G2078995 NA non-coding upstream 4561 36768112 ~ 36769034 (+)
G2078994 NA non-coding upstream 7023 36762114 ~ 36766572 (+)
G2078992 NA non-coding upstream 9513 36759262 ~ 36764082 (+)
G2078989 NA non-coding upstream 18833 36751605 ~ 36754762 (+)
G2078985 NA non-coding upstream 25445 36745636 ~ 36748150 (+)
G2078999 NA non-coding downstream 2730 36776612 ~ 36777816 (+)
G2079000 NA non-coding downstream 3940 36777822 ~ 36778118 (+)
G2079003 NA non-coding downstream 10833 36784715 ~ 36882247 (+)
G2079004 NA non-coding downstream 16762 36790644 ~ 36791616 (+)
G2079009 NA non-coding downstream 33555 36807437 ~ 36813290 (+)
G2078493 NA other upstream 471553 36263506 ~ 36302664 (+)
G2078425 NA other upstream 669494 36102874 ~ 36104101 (+)
G2078382 NA other upstream 739596 36033285 ~ 36033999 (+)
G2078296 NA other upstream 841086 35932115 ~ 35932509 (+)
G2079197 NA other downstream 505223 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 592857 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1041996 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1171050 37944932 ~ 37945151 (+)

Expression


Co-expression Network