G2079009


Basic Information

Item Value
gene id G2079009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36807437 ~ 36813290 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377102
ctctagtcccgtagttctctagtcccttcctctAGTCCCACAGTTCTCTAATCCTCTAggcccttcccctagttctctagtcccttcctctAGTCCCATCCTCTTGTCcctttctctagttctctagtcctctcctcttgtcccgtagttctctagtcccttccactagttctctagtcctctagtcccttcccctagtccccTCCTCTTGTCcctttctctagttctctagtcctctcctcttgtcccgtagttctctagtcccttcccgtagttctctagtcccttcccctagttctctagttctctagtcccttcccctagttctctagtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377102 True 335 lncRNA 0.51 3 36807437 36813290

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 103914 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 188711 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 260940 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 366728 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 426426 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 217871 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 505426 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 692271 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 692439 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 723239 37536529 ~ 37568873 (+)
G2079004 NA non-coding upstream 15821 36790644 ~ 36791616 (+)
G2079000 NA non-coding upstream 29319 36777822 ~ 36778118 (+)
G2078999 NA non-coding upstream 29621 36776612 ~ 36777816 (+)
G2078997 NA non-coding upstream 33555 36773595 ~ 36773882 (+)
G2078995 NA non-coding upstream 38403 36768112 ~ 36769034 (+)
G2079016 NA non-coding downstream 39496 36852786 ~ 36853136 (+)
G2079027 NA non-coding downstream 69017 36882307 ~ 36942036 (+)
G2079055 NA non-coding downstream 137173 36950463 ~ 36950863 (+)
G2079057 NA non-coding downstream 139086 36952376 ~ 36952888 (+)
G2079064 NA non-coding downstream 151204 36964494 ~ 36964803 (+)
G2078493 NA other upstream 505395 36263506 ~ 36302664 (+)
G2078425 NA other upstream 703336 36102874 ~ 36104101 (+)
G2078382 NA other upstream 773438 36033285 ~ 36033999 (+)
G2078296 NA other upstream 874928 35932115 ~ 35932509 (+)
G2079197 NA other downstream 465815 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 553449 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1002588 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1131642 37944932 ~ 37945151 (+)

Expression


Co-expression Network