G2079027


Basic Information

Item Value
gene id G2079027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36882307 ~ 36942036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377129
ctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacaccaaacatgtggaagaaggtgctctggtcagattaaatcaaaattgaactttttggcaacaatgcaagacgttatgtttagcgtaaaagcaacacagcccatcaccctgaacacatcatccccactgtcaaacatggtggtggcag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377129 True 228 lncRNA 0.41 2 36882307 36942036

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 18340 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 178784 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 263581 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 335810 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 441598 36438225 ~ 36440709 (+)
LOC110536894 NA coding downstream 89125 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 376680 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 563525 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 563693 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 594493 37536529 ~ 37568873 (+)
G2079003 NA non-coding upstream 60 36784715 ~ 36882247 (+)
G2079016 NA non-coding upstream 29171 36852786 ~ 36853136 (+)
G2079009 NA non-coding upstream 69017 36807437 ~ 36813290 (+)
G2079004 NA non-coding upstream 90691 36790644 ~ 36791616 (+)
G2079000 NA non-coding upstream 104189 36777822 ~ 36778118 (+)
G2079055 NA non-coding downstream 8427 36950463 ~ 36950863 (+)
G2079057 NA non-coding downstream 10340 36952376 ~ 36952888 (+)
G2079064 NA non-coding downstream 22458 36964494 ~ 36964803 (+)
G2079065 NA non-coding downstream 23363 36965399 ~ 36965623 (+)
G2079066 NA non-coding downstream 24067 36966103 ~ 36966333 (+)
G2078493 NA other upstream 580265 36263506 ~ 36302664 (+)
G2078425 NA other upstream 778206 36102874 ~ 36104101 (+)
G2078382 NA other upstream 848308 36033285 ~ 36033999 (+)
G2078296 NA other upstream 949798 35932115 ~ 35932509 (+)
G2079197 NA other downstream 337069 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 424703 37366739 ~ 37368136 (+)
G2079657 NA other downstream 873842 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1002896 37944932 ~ 37945151 (+)

Expression


Co-expression Network