G2079055


Basic Information

Item Value
gene id G2079055
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36950463 ~ 36950863 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377157
CATTACAATAATATTGTTTGTATTTTATATCACATAAATGATCCAAATAACAAGCTACTCTGAATTGTACATACTGAGATCAATACAACCACTGACTCATGTCTTAAATGCAGCCAATAGCATAGGCCAATAGCATGGGCCAATAGCATAGGCCAATAGCATGGGCCAATAGCATAGGCCAATAGCATGGGCCAATAGCATGGGCCAATAGCATAGGCCAATAGCATAGGCCAATAGCATAGGCCAATAGCATAGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377157 True 258 lncRNA 0.41 2 36950463 36950863

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 86496 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 246940 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 331737 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 403966 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 509754 36438225 ~ 36440709 (+)
LOC110536894 NA coding downstream 80298 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 367853 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 554698 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 554866 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 585666 37536529 ~ 37568873 (+)
G2079027 NA non-coding upstream 8427 36882307 ~ 36942036 (+)
G2079003 NA non-coding upstream 68216 36784715 ~ 36882247 (+)
G2079016 NA non-coding upstream 97327 36852786 ~ 36853136 (+)
G2079009 NA non-coding upstream 137173 36807437 ~ 36813290 (+)
G2079004 NA non-coding upstream 158847 36790644 ~ 36791616 (+)
G2079057 NA non-coding downstream 1513 36952376 ~ 36952888 (+)
G2079064 NA non-coding downstream 13631 36964494 ~ 36964803 (+)
G2079065 NA non-coding downstream 14536 36965399 ~ 36965623 (+)
G2079066 NA non-coding downstream 15240 36966103 ~ 36966333 (+)
G2079069 NA non-coding downstream 19459 36970322 ~ 36970521 (+)
G2078493 NA other upstream 648421 36263506 ~ 36302664 (+)
G2078425 NA other upstream 846362 36102874 ~ 36104101 (+)
G2078382 NA other upstream 916464 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1017954 35932115 ~ 35932509 (+)
G2079197 NA other downstream 328242 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 415876 37366739 ~ 37368136 (+)
G2079657 NA other downstream 865015 37815848 ~ 37819286 (+)
G2080014 NA other downstream 994069 37944932 ~ 37945151 (+)

Expression


Co-expression Network