G2079016


Basic Information

Item Value
gene id G2079016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36852786 ~ 36853136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377114
GTTGATCTAGTTCAACCTGAGCTCCTGCAAAGACGATGGTTGCTCTAGTTCAACctgagcttctgcaaAGACCATGGTTGCTCTAGTTCAACctgagcttctgcaaAGACCATGGTTGCTCTAgttcaacctgagcttctgcagccACCTGTGGGAGCCTATCAAggaactgctgtgtcactgttttatCCCCTGtatactcacacttgtagagctcagcatagaacactactgccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377114 True 237 lncRNA 0.49 3 36852786 36853136

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 149263 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 234060 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 306289 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 412077 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 471775 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 178025 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 465580 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 652425 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 652593 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 683393 37536529 ~ 37568873 (+)
G2079009 NA non-coding upstream 39496 36807437 ~ 36813290 (+)
G2079004 NA non-coding upstream 61170 36790644 ~ 36791616 (+)
G2079000 NA non-coding upstream 74668 36777822 ~ 36778118 (+)
G2078999 NA non-coding upstream 74970 36776612 ~ 36777816 (+)
G2078997 NA non-coding upstream 78904 36773595 ~ 36773882 (+)
G2079027 NA non-coding downstream 29171 36882307 ~ 36942036 (+)
G2079055 NA non-coding downstream 97327 36950463 ~ 36950863 (+)
G2079057 NA non-coding downstream 99240 36952376 ~ 36952888 (+)
G2079064 NA non-coding downstream 111358 36964494 ~ 36964803 (+)
G2079065 NA non-coding downstream 112263 36965399 ~ 36965623 (+)
G2078493 NA other upstream 550744 36263506 ~ 36302664 (+)
G2078425 NA other upstream 748685 36102874 ~ 36104101 (+)
G2078382 NA other upstream 818787 36033285 ~ 36033999 (+)
G2078296 NA other upstream 920277 35932115 ~ 35932509 (+)
G2079197 NA other downstream 425969 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 513603 37366739 ~ 37368136 (+)
G2079657 NA other downstream 962742 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1091796 37944932 ~ 37945151 (+)

Expression


Co-expression Network