G2078999


Basic Information

Item Value
gene id G2078999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36776612 ~ 36777816 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377080
catcattactactaccatcatcattactactaccatcatcattacaactaccatcatcattactactaccatcatcattacaactaccatcatcattaccactaccatcattactTCTACCATCATctttacaactaccatcatcatcattactactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattaccactaccatcatcattactactaccatcatcattactactaccatcatcattactactaccatcatcattactactaccatcatcattacaactaccatcatcattacaactgccatcatcattacaactaccatcatcattactactaccatcatcattacaactaccatcatcattactactaccatcatcatcattactactaccatcatcatcattactactaccatcatcattactactaccatcatcattacaactaccatcatcattacttctaccatcatcattattactaccatcattacaactaccatcatcattacaactaccatcattacaactaccatcatcattactactaccatcatcattacaactaccatcatcattactactacca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377080 True 647 lncRNA 0.34 2 36776612 36777816

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 73089 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 157886 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 230115 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 335903 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 395601 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 253345 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 540900 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 727745 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 727913 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 758713 37536529 ~ 37568873 (+)
G2078997 NA non-coding upstream 2730 36773595 ~ 36773882 (+)
G2078995 NA non-coding upstream 7578 36768112 ~ 36769034 (+)
G2078994 NA non-coding upstream 10040 36762114 ~ 36766572 (+)
G2078992 NA non-coding upstream 12530 36759262 ~ 36764082 (+)
G2078989 NA non-coding upstream 21850 36751605 ~ 36754762 (+)
G2079000 NA non-coding downstream 6 36777822 ~ 36778118 (+)
G2079003 NA non-coding downstream 6899 36784715 ~ 36882247 (+)
G2079004 NA non-coding downstream 12828 36790644 ~ 36791616 (+)
G2079009 NA non-coding downstream 29621 36807437 ~ 36813290 (+)
G2079016 NA non-coding downstream 74970 36852786 ~ 36853136 (+)
G2078493 NA other upstream 474570 36263506 ~ 36302664 (+)
G2078425 NA other upstream 672511 36102874 ~ 36104101 (+)
G2078382 NA other upstream 742613 36033285 ~ 36033999 (+)
G2078296 NA other upstream 844103 35932115 ~ 35932509 (+)
G2079197 NA other downstream 501289 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 588923 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1038062 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1167116 37944932 ~ 37945151 (+)

Expression


Co-expression Network