G2078989


Basic Information

Item Value
gene id G2078989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36751605 ~ 36754762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377067
acttataactgtcatcctcaccattacatcattacaacttccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattactactaccatcatcattacaactaccatcatcattacaactaccatcaacattacctctaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatacaactaccatcatcattacaactaccatcatcattactactaccatcatcattacaactaccatcatcattattactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattattactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattaccactaccatcatcattacaactaccatcatcattacaactaccatcaccattacaactaccatcatcattacaactaccatcatcattacacctaccatcatcattaccgctaccatcatcattaccactaccatcatcgttacaactaccatcatcattacaactaccatcatcattacaactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattaccactaccatcatcattacaactacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377067 True 812 lncRNA 0.35 5 36751605 36754762

Neighbor

gene id symbol gene type direction distance location
LOC118936607 LOC106581404 coding upstream 48082 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 132879 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 205108 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 310896 36438225 ~ 36440709 (+)
naalad2 LOC106581411 coding upstream 370594 36365655 ~ 36381011 (+)
LOC110536894 NA coding downstream 276399 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 563954 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 750799 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 750967 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 781767 37536529 ~ 37568873 (+)
G2078985 NA non-coding upstream 3455 36745636 ~ 36748150 (+)
G2078986 NA non-coding upstream 4803 36746018 ~ 36746802 (+)
G2078984 NA non-coding upstream 8060 36742719 ~ 36743545 (+)
G2078960 NA non-coding upstream 44085 36707296 ~ 36707520 (+)
G2078959 NA non-coding upstream 46082 36704985 ~ 36705523 (+)
G2078992 NA non-coding downstream 4500 36759262 ~ 36764082 (+)
G2078994 NA non-coding downstream 7352 36762114 ~ 36766572 (+)
G2078995 NA non-coding downstream 13350 36768112 ~ 36769034 (+)
G2078997 NA non-coding downstream 18833 36773595 ~ 36773882 (+)
G2078999 NA non-coding downstream 21850 36776612 ~ 36777816 (+)
G2078493 NA other upstream 449563 36263506 ~ 36302664 (+)
G2078425 NA other upstream 647504 36102874 ~ 36104101 (+)
G2078382 NA other upstream 717606 36033285 ~ 36033999 (+)
G2078296 NA other upstream 819096 35932115 ~ 35932509 (+)
G2079197 NA other downstream 524343 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 611977 37366739 ~ 37368136 (+)
G2079657 NA other downstream 1061116 37815848 ~ 37819286 (+)
G2080014 NA other downstream 1190170 37944932 ~ 37945151 (+)

Expression


Co-expression Network