G2079114


Basic Information

Item Value
gene id G2079114
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37081793 ~ 37082232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377226
AGCGAACCTTAAATAAATGGCGTGAACAATAAATAAACCGCTCCGTTTCGGCATTCACGAATACATGCGACTGTTTTACTATTTGCTAtttgtaataaaggctttacaaaaagaaaataaaaaaagttacAACAGACTCTGTCACGCTGTGTAATGATAGGAGACCATGAAAACGATGgggacaaagcccaaaacagacatgtatgtatgtatatacatatatatatatacattgcaGTTctagaagagttaagaaaatatttaacaaataaacaaaagtaaaaaataataaaaagtaacgcaataacataacaataacgaggctatatacagagggtaccgagtcagtgtgcaggggtacaggttagaggtaatatgtacatgtagataaggGTGAAGagattatgcatagataataagcagtaagtagcagcagtgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377226 True 440 lncRNA 0.34 1 37081793 37082232

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 217826 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 378270 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 463067 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 535296 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 641084 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 236484 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 423329 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 423497 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 454297 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 970401 38052633 ~ 38060113 (+)
G2079113 NA non-coding upstream 4625 37075054 ~ 37077168 (+)
G2079106 NA non-coding upstream 18813 37062698 ~ 37062980 (+)
G2079105 NA non-coding upstream 19280 37062283 ~ 37062513 (+)
G2079102 NA non-coding upstream 23430 37058082 ~ 37058363 (+)
G2079093 NA non-coding upstream 48320 37033263 ~ 37033473 (+)
G2079116 NA non-coding downstream 3042 37085274 ~ 37085574 (+)
G2079130 NA non-coding downstream 39916 37122148 ~ 37122352 (+)
G2079134 NA non-coding downstream 44979 37127211 ~ 37127440 (+)
G2079136 NA non-coding downstream 46587 37128819 ~ 37129029 (+)
G2079155 NA non-coding downstream 101261 37183493 ~ 37183832 (+)
G2078493 NA other upstream 779751 36263506 ~ 36302664 (+)
G2078425 NA other upstream 977692 36102874 ~ 36104101 (+)
G2078382 NA other upstream 1047794 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1149284 35932115 ~ 35932509 (+)
LOC110536894 NA other downstream 191254 37031161 ~ 37276857 (+)
G2079197 NA other downstream 196873 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 284507 37366739 ~ 37368136 (+)
G2079657 NA other downstream 733646 37815848 ~ 37819286 (+)
G2080014 NA other downstream 862700 37944932 ~ 37945151 (+)

Expression


Co-expression Network