G2079105


Basic Information

Item Value
gene id G2079105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37062283 ~ 37062513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377210
ttatctacagttatactacaacatatttatctacagttatactacaacatggttatctacagttatactacaacatatttatctacagttatactacaacatggttatctacagttatactacaacatggttatctacagttatactacaacatggttatctacagttacactacaacatggttatctacagttacactacaacatggttatctacagttacactacaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377210 True 231 lncRNA 0.30 1 37062283 37062513

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 198316 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 358760 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 443557 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 515786 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 621574 36438225 ~ 36440709 (+)
mre11a mre11a coding downstream 256203 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 443048 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 443216 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 474016 37536529 ~ 37568873 (+)
LOC110508017 NA coding downstream 990120 38052633 ~ 38060113 (+)
G2079102 NA non-coding upstream 3920 37058082 ~ 37058363 (+)
G2079093 NA non-coding upstream 28810 37033263 ~ 37033473 (+)
G2079091 NA non-coding upstream 31813 37014509 ~ 37030470 (+)
G2079078 NA non-coding upstream 79320 36982763 ~ 36982963 (+)
G2079076 NA non-coding upstream 81541 36980523 ~ 36980742 (+)
G2079106 NA non-coding downstream 185 37062698 ~ 37062980 (+)
G2079113 NA non-coding downstream 12541 37075054 ~ 37077168 (+)
G2079114 NA non-coding downstream 19280 37081793 ~ 37082232 (+)
G2079116 NA non-coding downstream 22761 37085274 ~ 37085574 (+)
G2079130 NA non-coding downstream 59635 37122148 ~ 37122352 (+)
G2078493 NA other upstream 760241 36263506 ~ 36302664 (+)
G2078425 NA other upstream 958182 36102874 ~ 36104101 (+)
G2078382 NA other upstream 1028284 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1129774 35932115 ~ 35932509 (+)
LOC110536894 NA other downstream 210973 37031161 ~ 37276857 (+)
G2079197 NA other downstream 216592 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 304226 37366739 ~ 37368136 (+)
G2079657 NA other downstream 753365 37815848 ~ 37819286 (+)
G2080014 NA other downstream 882419 37944932 ~ 37945151 (+)

Expression


Co-expression Network