G2079091


Basic Information

Item Value
gene id G2079091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 37014509 ~ 37030470 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377194
tcagtgttgtagtatatatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctgctcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtgtatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatgtagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcaatgttgtagtgtatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtactgtgtagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatgtagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtactgtgtagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatatatagttctggtcagtgttgtagtgtatatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtactgtgtagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtgtagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatatagttatggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttttggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatatagttctggtcagtgttatagtatatatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtgtatagttctggtcagtgttgtagtatatagttctggtctgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377194 True 3021 lncRNA 0.38 2 37014509 37030470

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 150542 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 310986 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 395783 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 468012 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 573800 36438225 ~ 36440709 (+)
LOC110536894 NA coding downstream 691 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 288246 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 475091 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 475259 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 506059 37536529 ~ 37568873 (+)
G2079078 NA non-coding upstream 31546 36982763 ~ 36982963 (+)
G2079076 NA non-coding upstream 33767 36980523 ~ 36980742 (+)
G2079071 NA non-coding upstream 42514 36971747 ~ 36971995 (+)
G2079069 NA non-coding upstream 43988 36970322 ~ 36970521 (+)
G2079066 NA non-coding upstream 48176 36966103 ~ 36966333 (+)
G2079093 NA non-coding downstream 2793 37033263 ~ 37033473 (+)
G2079102 NA non-coding downstream 27612 37058082 ~ 37058363 (+)
G2079105 NA non-coding downstream 31813 37062283 ~ 37062513 (+)
G2079106 NA non-coding downstream 32228 37062698 ~ 37062980 (+)
G2079113 NA non-coding downstream 44584 37075054 ~ 37077168 (+)
G2078493 NA other upstream 712467 36263506 ~ 36302664 (+)
G2078425 NA other upstream 910408 36102874 ~ 36104101 (+)
G2078382 NA other upstream 980510 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1082000 35932115 ~ 35932509 (+)
G2079197 NA other downstream 248635 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 336269 37366739 ~ 37368136 (+)
G2079657 NA other downstream 785408 37815848 ~ 37819286 (+)
G2080014 NA other downstream 914462 37944932 ~ 37945151 (+)

Expression


Co-expression Network