G2079078


Basic Information

Item Value
gene id G2079078
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36982763 ~ 36982963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2377180
tctgtctcctcctcagccacagagactactgactgactgactgtctgttcctcagccacagagactactgactgactgactgactgtctgttcctcagccacagtgactactgactgactgactgaccctctgtctcctcctcagccacagagactactgactgactgactatctgtTCCTCAGCCACAgagactactgac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2377180 True 201 lncRNA 0.52 1 36982763 36982963

Neighbor

gene id symbol gene type direction distance location
LOC110507948 LOC106581405 coding upstream 118796 36707926 ~ 36863967 (+)
LOC118936607 LOC106581404 coding upstream 279240 36678773 ~ 36703523 (+)
LOC118944683 NA coding upstream 364037 36610735 ~ 36618726 (+)
LOC110507218 LOC106591049 coding upstream 436266 36453761 ~ 36546497 (+)
LOC110508005 LOC106613226 coding upstream 542054 36438225 ~ 36440709 (+)
LOC110536894 NA coding downstream 48198 37031161 ~ 37276857 (+)
mre11a mre11a coding downstream 335753 37318716 ~ 37357606 (+)
trnat-agu-151 NA coding downstream 522598 37505561 ~ 37505634 (+)
trnat-agu-152 NA coding downstream 522766 37505729 ~ 37505802 (+)
LOC110508012 LOC106581399 coding downstream 553566 37536529 ~ 37568873 (+)
G2079076 NA non-coding upstream 2021 36980523 ~ 36980742 (+)
G2079071 NA non-coding upstream 10768 36971747 ~ 36971995 (+)
G2079069 NA non-coding upstream 12242 36970322 ~ 36970521 (+)
G2079066 NA non-coding upstream 16430 36966103 ~ 36966333 (+)
G2079065 NA non-coding upstream 17140 36965399 ~ 36965623 (+)
G2079091 NA non-coding downstream 31546 37014509 ~ 37030470 (+)
G2079093 NA non-coding downstream 50300 37033263 ~ 37033473 (+)
G2079102 NA non-coding downstream 75119 37058082 ~ 37058363 (+)
G2079105 NA non-coding downstream 79320 37062283 ~ 37062513 (+)
G2079106 NA non-coding downstream 79735 37062698 ~ 37062980 (+)
G2078493 NA other upstream 680721 36263506 ~ 36302664 (+)
G2078425 NA other upstream 878662 36102874 ~ 36104101 (+)
G2078382 NA other upstream 948764 36033285 ~ 36033999 (+)
G2078296 NA other upstream 1050254 35932115 ~ 35932509 (+)
G2079197 NA other downstream 296142 37279105 ~ 37280832 (+)
G2079468 LOC106581367 other downstream 383776 37366739 ~ 37368136 (+)
G2079657 NA other downstream 832915 37815848 ~ 37819286 (+)
G2080014 NA other downstream 961969 37944932 ~ 37945151 (+)

Expression


Co-expression Network