RNA id: TU2377180


Basic Information

Item Value
RNA id TU2377180
length 201
lncRNA type inter_gene
GC content 0.52
exon number 1
gene id G2079078
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 36982763 ~ 36982963 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

tctgtctcctcctcagccacagagactactgactgactgactgtctgttcctcagccacagagactactgactgactgactgactgtctgttcctcagccacagtgactactgactgactgactgaccctctgtctcctcctcagccacagagactactgactgactgactatctgtTCCTCAGCCACAgagactactgac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2377178 lncRNA upstream 2021 36980523 ~ 36980742 (+) True G2079076
TU2377173 lncRNA upstream 10768 36971747 ~ 36971995 (+) True G2079071
TU2377171 lncRNA upstream 12242 36970322 ~ 36970521 (+) True G2079069
TU2377168 lncRNA upstream 16430 36966103 ~ 36966333 (+) True G2079066
TU2377167 lncRNA upstream 17140 36965399 ~ 36965623 (+) True G2079065
TU2377194 lncRNA downstream 31546 37014509 ~ 37030470 (+) True G2079091
TU2377197 lncRNA downstream 50300 37033263 ~ 37033473 (+) True G2079093
TU2377207 lncRNA downstream 75119 37058082 ~ 37058363 (+) True G2079102
TU2377210 lncRNA downstream 79320 37062283 ~ 37062513 (+) True G2079105
TU2377211 lncRNA downstream 79735 37062698 ~ 37062980 (+) True G2079106
XM_036965234.1 mRNA upstream 118796 36707926 ~ 36863967 (+) False LOC110507948
XM_036965235.1 mRNA upstream 118796 36707926 ~ 36863967 (+) False LOC110507948
XM_036965236.1 mRNA upstream 118796 36707926 ~ 36863967 (+) False LOC110507948
XM_036965238.1 mRNA upstream 118796 36736717 ~ 36863967 (+) True LOC110507948
XM_036965237.1 mRNA upstream 132745 36707926 ~ 36850018 (+) False LOC110507948
XM_036964740.1 mRNA downstream 48198 37031161 ~ 37275082 (+) False LOC110536894
XM_036965198.1 mRNA downstream 335753 37318716 ~ 37357606 (+) True mre11a
trnat-agu-151 mRNA downstream 522598 37505561 ~ 37505634 (+) True trnat-agu-151
trnat-agu-152 mRNA downstream 522766 37505729 ~ 37505802 (+) True trnat-agu-152
XM_036965780.1 mRNA downstream 553566 37536529 ~ 37568873 (+) False LOC110508012
TU2376553 other upstream 543409 36438375 ~ 36439354 (+) True LOC110508005
TU2376423 other upstream 680721 36300938 ~ 36302042 (+) False G2078493
TU2377138 other downstream 290523 37273486 ~ 37276857 (+) True LOC110536894
TU2377335 other downstream 296142 37279105 ~ 37280832 (+) True G2079197
TU2377712 other downstream 383776 37366739 ~ 37368136 (+) True G2079468
TU2377942 other downstream 832915 37815878 ~ 37819286 (+) False G2079657
TU2377944 other downstream 832915 37815878 ~ 37819286 (+) True G2079657

Expression Profile