XLOC_004000 (BX000700.23)


Basic Information

Item Value
gene id XLOC_004000
gene name BX000700.23
gene type misc
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 12438084 ~ 12438380 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00007634
GCCGGGTGCAGTGGCGCGCGCCTGTAATCCAAGCTACTGGGAGGCTGAGGCTGCGGatcgcttgagctcagggcttctggACTGCAGTGGACTATGTTGATCGGGTGTCCACACTAAGTTCGGTATCGATATGGTGCTCCTGGGGGAGCTTGGGACCACCAGGTCGTGTAATGAGGGGTGAACCGGCCCAGGTCGGCGACGGAGCAGGTCAAATCCCCCGTGCTGATCAGTAGTGGGATCACACCTGACAATAGACACTGCAGTGCAGCCTGAGtgacacagagagacgcagacttT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000115479

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00007634 True 297 misc_RNA 0.59 1 12438084 12438380

Neighbor

gene id symbol gene type direction distance location
XLOC_003999 zgc:174355 coding downstream 850 12435301 ~ 12437234 (-)
XLOC_003996 si:dkey-27d5.9 coding downstream 20132 12416065 ~ 12417952 (-)
XLOC_003994 si:dkey-27d5.10 coding downstream 43402 12392715 ~ 12394682 (-)
XLOC_003993 zgc:174353 coding downstream 58543 12377621 ~ 12379541 (-)
XLOC_003992 zgc:174353 coding downstream 73962 12362231 ~ 12364122 (-)
XLOC_004001 zgc:174354 coding upstream 12184 12450564 ~ 12452482 (-)
XLOC_004002 NA coding upstream 25320 12463700 ~ 12464486 (-)
XLOC_004003 si:dkey-27d5.6 coding upstream 31709 12470089 ~ 12472006 (-)
XLOC_004004 si:dkey-27d5.5 coding upstream 43005 12481385 ~ 12483302 (-)
XLOC_004005 si:dkey-27d5.4 coding upstream 58800 12497180 ~ 12499116 (-)
XLOC_003995 BX000700.6 misc downstream 42270 12395518 ~ 12395814 (-)
XLOC_003991 BX000700.22 misc downstream 86529 12351259 ~ 12351555 (-)
XLOC_003988 LO017719.2 misc downstream 114158 12323630 ~ 12323926 (-)
XLOC_003985 CABZ01022564.3 misc downstream 148416 12289372 ~ 12289668 (-)
XLOC_003983 FO904934.1 misc downstream 183928 12253860 ~ 12254156 (-)
XLOC_004006 BX000700.27 misc upstream 61586 12499966 ~ 12500262 (-)
XLOC_004008 BX000700.19 misc upstream 74586 12512966 ~ 12513262 (-)
XLOC_004013 CABZ01022569.1 misc upstream 152619 12590999 ~ 12591296 (-)
XLOC_004015 CR450764.4 misc upstream 183138 12621518 ~ 12621767 (-)
XLOC_004019 CR450764.8 misc upstream 253015 12691395 ~ 12691691 (-)
XLOC_003977 NA non-coding downstream 224653 12213149 ~ 12213431 (-)
XLOC_003975 NA non-coding downstream 251940 12185854 ~ 12186144 (-)
XLOC_003972 NA non-coding downstream 272077 12165723 ~ 12166007 (-)
XLOC_003962 CR848705.2 non-coding downstream 731948 11639483 ~ 11706136 (-)
XLOC_003960 NA non-coding downstream 836204 11594994 ~ 11601880 (-)
XLOC_004024 CR450764.5 non-coding upstream 317763 12756143 ~ 12756275 (-)
XLOC_004029 BX530062.1 non-coding upstream 1044291 13482671 ~ 13482787 (-)
XLOC_004032 CR555295.1 non-coding upstream 1360073 13798453 ~ 13800802 (-)
XLOC_004034 NA non-coding upstream 1709283 14147663 ~ 14148426 (-)

Expression


Co-expression Network