G2105053


Basic Information

Item Value
gene id G2105053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12745401 ~ 12745611 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2407700
CTGGAGGTCAACCTGGTCTACATGCAGGGCATCAGCTTTAGTAAGGGCTGTTCCATCGGCCAGGACTCATCACAATGGGGTGGTACGGAAACATCTGATGCCGTACGCATGTCGGCACTACCCGAAGGATTGGCACCTCAGACCCAGTCTGGCAAGTCAGCCGGGAAGCACAGAGTTGGAGATCTGGGCATTCACCTGGCTCATGCCAAAG

Function

NR:

description
putative transferase CAF17, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2407700 True 211 lncRNA 0.56 1 12745401 12745611

Neighbor

gene id symbol gene type direction distance location
LOC110508573 LOC106599884 coding upstream 11861 12706958 ~ 12733540 (+)
LOC110508572 LOC106599887 coding upstream 44453 12698971 ~ 12700948 (+)
pth1r LOC106599896 coding upstream 114564 12544539 ~ 12630837 (+)
LOC110508566 LOC106599903 coding upstream 242689 12422287 ~ 12502712 (+)
LOC110508562 LOC106600434 coding upstream 523566 12206077 ~ 12221835 (+)
LOC110508574 LOC106599880 coding downstream 4075 12749686 ~ 12756386 (+)
LOC110508578 LOC106599872 coding downstream 236194 12981805 ~ 13010377 (+)
LOC110508579 arf1 coding downstream 314969 13060580 ~ 13065707 (+)
LOC110508581 kgua coding downstream 334987 13080598 ~ 13102331 (+)
LOC100136204 LOC100136204 coding downstream 472386 13217997 ~ 13219450 (+)
G2105049 NA non-coding upstream 4678 12740081 ~ 12740723 (+)
G2104921 NA non-coding upstream 8948 12735103 ~ 12736453 (+)
G2105013 NA non-coding upstream 66579 12677860 ~ 12678822 (+)
G2104859 NA non-coding upstream 248298 12496398 ~ 12497103 (+)
G2105064 NA non-coding downstream 17707 12763318 ~ 12763555 (+)
G2105074 NA non-coding downstream 30511 12776122 ~ 12776361 (+)
G2105087 NA non-coding downstream 49486 12795097 ~ 12795311 (+)
G2106261 NA non-coding downstream 86683 12832294 ~ 12832589 (+)
G2106280 NA non-coding downstream 99500 12845111 ~ 12845458 (+)
G2104555 NA other upstream 812309 11889116 ~ 11933092 (+)
LOC110508540 LOC106600420 other upstream 1254566 11488248 ~ 11491159 (+)
G2103533 LOC105021892 other upstream 1992441 10713576 ~ 10752960 (+)
G2103519 NA other upstream 2042381 10702728 ~ 10703020 (+)
LOC110508500 LOC106600383 other upstream 2222763 10510527 ~ 10524470 (+)
G2106278 NA other downstream 98776 12844387 ~ 12844904 (+)
G2106543 NA other downstream 381351 13126962 ~ 13127231 (+)
G2106548 NA other downstream 387788 13133399 ~ 13133761 (+)
G2106549 NA other downstream 388283 13133894 ~ 13134485 (+)
G2106557 NA other downstream 397702 13143313 ~ 13143595 (+)

Expression


Co-expression Network