G2106280


Basic Information

Item Value
gene id G2106280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048592.1
NCBI id CM023246.2
chromosome length 43716683
location 12845111 ~ 12845458 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2409061
AGACTGTCCTGGGAGATCTGAGGGGTAGAAATTGTCTTGTGtatctggatgacatcataatctactcctcctctgtcgcGGAACATCTGCAAGACATTCAGTCCGTCTTCGACAGACTAAAGGCTGCAGGTTTGACCTTGAACTTGAAGAAGTGTCGTTTTTGTCTGCCAGAACTCAAGTTCCTTGGTCATGTGGTTAATGCTGAAGGTATCCATGCAGATCCAGACAAAGTTGCAGCCGTGCAGGAATTCCCAATTCCCACATCCCTCAAGGCTGTTCAGCGGTTTCTGGGTATGGCTGGATGGTACCACAGGTTTGTGCCTGACTTTTCAAAGGTAGCCGAACCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2409061 True 348 lncRNA 0.49 1 12845111 12845458

Neighbor

gene id symbol gene type direction distance location
LOC110508574 LOC106599880 coding upstream 88725 12749686 ~ 12756386 (+)
LOC110508573 LOC106599884 coding upstream 111571 12706958 ~ 12733540 (+)
LOC110508572 LOC106599887 coding upstream 144163 12698971 ~ 12700948 (+)
pth1r LOC106599896 coding upstream 214274 12544539 ~ 12630837 (+)
LOC110508566 LOC106599903 coding upstream 342399 12422287 ~ 12502712 (+)
LOC110508578 LOC106599872 coding downstream 136347 12981805 ~ 13010377 (+)
LOC110508579 arf1 coding downstream 215122 13060580 ~ 13065707 (+)
LOC110508581 kgua coding downstream 235140 13080598 ~ 13102331 (+)
LOC100136204 LOC100136204 coding downstream 372539 13217997 ~ 13219450 (+)
LOC118944853 LOC100136204 coding downstream 379935 13225393 ~ 13226868 (+)
G2106261 NA non-coding upstream 12522 12832294 ~ 12832589 (+)
G2105087 NA non-coding upstream 49800 12795097 ~ 12795311 (+)
G2105074 NA non-coding upstream 68750 12776122 ~ 12776361 (+)
G2105064 NA non-coding upstream 81556 12763318 ~ 12763555 (+)
G2105053 NA non-coding upstream 99500 12745401 ~ 12745611 (+)
G2106283 NA non-coding downstream 3891 12849349 ~ 12849616 (+)
G2106295 NA non-coding downstream 10767 12856225 ~ 12856436 (+)
G2106297 NA non-coding downstream 11507 12856965 ~ 12857261 (+)
G2106368 NA non-coding downstream 113016 12958474 ~ 12958758 (+)
G2106445 NA non-coding downstream 124251 12969709 ~ 12970290 (+)
G2106278 NA other upstream 207 12844387 ~ 12844904 (+)
G2104555 NA other upstream 912019 11889116 ~ 11933092 (+)
LOC110508540 LOC106600420 other upstream 1354276 11488248 ~ 11491159 (+)
G2103533 LOC105021892 other upstream 2092151 10713576 ~ 10752960 (+)
G2103519 NA other upstream 2142091 10702728 ~ 10703020 (+)
G2106543 NA other downstream 281504 13126962 ~ 13127231 (+)
G2106548 NA other downstream 287941 13133399 ~ 13133761 (+)
G2106549 NA other downstream 288436 13133894 ~ 13134485 (+)
G2106557 NA other downstream 297855 13143313 ~ 13143595 (+)
G2107033 NA other downstream 1065969 13911427 ~ 13913227 (+)

Expression


Co-expression Network