Gene
RNA
| Item | Value |
|---|---|
| gene id | G2105087 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 12795097 ~ 12795311 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2407736 | True | 215 | lncRNA | 0.35 | 1 | 12795097 | 12795311 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110508574 | LOC106599880 | coding | upstream | 38711 | 12749686 ~ 12756386 (+) |
| LOC110508573 | LOC106599884 | coding | upstream | 61557 | 12706958 ~ 12733540 (+) |
| LOC110508572 | LOC106599887 | coding | upstream | 94149 | 12698971 ~ 12700948 (+) |
| pth1r | LOC106599896 | coding | upstream | 164260 | 12544539 ~ 12630837 (+) |
| LOC110508566 | LOC106599903 | coding | upstream | 292385 | 12422287 ~ 12502712 (+) |
| LOC110508578 | LOC106599872 | coding | downstream | 186494 | 12981805 ~ 13010377 (+) |
| LOC110508579 | arf1 | coding | downstream | 265269 | 13060580 ~ 13065707 (+) |
| LOC110508581 | kgua | coding | downstream | 285287 | 13080598 ~ 13102331 (+) |
| LOC100136204 | LOC100136204 | coding | downstream | 422686 | 13217997 ~ 13219450 (+) |
| LOC118944853 | LOC100136204 | coding | downstream | 430082 | 13225393 ~ 13226868 (+) |
| G2105074 | NA | non-coding | upstream | 18736 | 12776122 ~ 12776361 (+) |
| G2105064 | NA | non-coding | upstream | 31542 | 12763318 ~ 12763555 (+) |
| G2105053 | NA | non-coding | upstream | 49486 | 12745401 ~ 12745611 (+) |
| G2105049 | NA | non-coding | upstream | 54374 | 12740081 ~ 12740723 (+) |
| G2104921 | NA | non-coding | upstream | 58644 | 12735103 ~ 12736453 (+) |
| G2106261 | NA | non-coding | downstream | 36983 | 12832294 ~ 12832589 (+) |
| G2106280 | NA | non-coding | downstream | 49800 | 12845111 ~ 12845458 (+) |
| G2106283 | NA | non-coding | downstream | 54038 | 12849349 ~ 12849616 (+) |
| G2106295 | NA | non-coding | downstream | 60914 | 12856225 ~ 12856436 (+) |
| G2106297 | NA | non-coding | downstream | 61654 | 12856965 ~ 12857261 (+) |
| G2104555 | NA | other | upstream | 862005 | 11889116 ~ 11933092 (+) |
| LOC110508540 | LOC106600420 | other | upstream | 1304262 | 11488248 ~ 11491159 (+) |
| G2103533 | LOC105021892 | other | upstream | 2042137 | 10713576 ~ 10752960 (+) |
| G2103519 | NA | other | upstream | 2092077 | 10702728 ~ 10703020 (+) |
| LOC110508500 | LOC106600383 | other | upstream | 2272459 | 10510527 ~ 10524470 (+) |
| G2106278 | NA | other | downstream | 49076 | 12844387 ~ 12844904 (+) |
| G2106543 | NA | other | downstream | 331651 | 13126962 ~ 13127231 (+) |
| G2106548 | NA | other | downstream | 338088 | 13133399 ~ 13133761 (+) |
| G2106549 | NA | other | downstream | 338583 | 13133894 ~ 13134485 (+) |
| G2106557 | NA | other | downstream | 348002 | 13143313 ~ 13143595 (+) |
